Stenotrophomonas sp. WZN-1: CCR98_07390
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Entry
CCR98_07390 CDS
T04963
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CCR98_07390 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sten02000
]
CCR98_07390 (msbA)
Enzymes [BR:
sten01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CCR98_07390 (msbA)
Transporters [BR:
sten02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CCR98_07390 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_30
AAA_22
nSTAND1
DUF3584
ABC_ATPase
AAA_21
AAA_29
AAA_23
Zeta_toxin
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
ARZ74003
LinkDB
All DBs
Position
1596540..1598288
Genome browser
AA seq
582 aa
AA seq
DB search
MSSHHAPVWPIYKRLLGYTRTYWVFMVGAVIAMVVEALAGYHFTKLMEPLVNEGFVDPQP
RAAVVLPLTILGLFLMRSVATWVSDYTLAKTGRSVVRDLREQVLQKYLHLPSSHFDTEAT
PVMVSRLNFDTEQVTQASADALKTVVADTLTIIAMLAVMLQMSVKVTLAMLLVVPLIGGI
VSYVGKRYRRISRGIQDGMGTMAQTAEQSLAAQQEVKVHGTQQHEISRYSRLANRMLALN
MKVEVTRAAASSVVQFLAALALAVIVWVSTREALAGRLNAGQFMGLMTSMMAIIPSLRRL
TSVQTSISRGVSAAERLFGILDMPVERDEGQHRVQRVRGELAFDHVMLRYREDSGIALDD
ISFVARPGTVTAIVGRSGSGKTSLIRLVPRFYEPSGGVITLDGVALDDYPLADLRRQVAM
VGQKVMLFDDTIAANIAYGMEATDEQIRAAAEAANAWEFIARMPQQLQTPVGENGALLSG
GQRQRLAIARAILRDAPILILDEATAALDNESERLVQDALQRLMPERTTLVIAHRLSTIE
HADQVLVMDHGRIVERGTHKELLELGGLYQHLHSMQFRERQD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccatcacgcgccggtgtggccgatctacaaacgtctgctgggctacacccgc
acctactgggtgttcatggtaggcgcggtcatcgccatggtggtcgaggctctggccggc
taccacttcaccaagctgatggagccgctggtcaacgaaggtttcgtcgacccgcagccg
cgcgcggccgtggtgctgccgctgaccatcctcggcctgttcctgatgcgcagcgtggcc
acctgggtcagcgactacacgctggccaagaccggccgcagcgtggtccgcgacctgcgt
gagcaggtgctgcagaagtacctgcacctgccgtcgtcgcacttcgataccgaagcgacg
ccggtgatggtcagccgcctcaacttcgatacggaacaggtcacccaggccagcgccgac
gcgctgaagaccgtggtggccgataccctcaccatcatcgcgatgctggcggtgatgctg
cagatgagtgtcaaggtcaccctggcgatgctgctggtggtgccgctgatcggtggcatc
gtgtcctacgtgggcaagcgctaccggcgcatcagccgcggcatccaggacggcatgggc
acgatggcgcagactgccgagcagtcgctggccgcgcagcaggaagtgaaggtgcacggc
acccagcaacatgagatctcgcgctactcgcgcctggccaaccgcatgctggcgctgaac
atgaaggtcgaggtcacccgcgccgccgcctccagcgtggtgcagttcctggccgcactg
gcgctggcggtgatcgtctgggtgtcgacccgcgaagcgctggcgggccgactcaatgcc
ggccagttcatgggcctgatgacctcgatgatggccatcatcccctcactgcgtcgcctg
accagcgtacagacctctatttcgcgcggtgtttccgccgccgagcgcctgttcggcatc
ctggacatgccggtggagcgtgatgagggccagcaccgcgtgcagcgcgtgcgcggcgaa
ctggcgttcgaccacgtcatgctgcgctaccgcgaagacagcggcattgccctggacgac
atcagtttcgttgccaggccgggtacggtgacggccatcgtcggccgctccggcagtggc
aagaccagcctgatccggctggtgccgcgcttctacgagcccagcggcggtgtcatcacc
ctcgatggcgtggccctggacgactacccgctggccgacctgcgccggcaggtggcgatg
gtcggtcagaaggtgatgctgttcgacgacaccatcgccgccaacatcgcctatggcatg
gaagcaaccgacgagcagatccgtgcggctgccgaagccgccaacgcctgggagttcatc
gcgcgcatgccgcagcagctgcagaccccggtgggcgagaacggtgcgctgctgtccggt
ggccagcgccagcgcctggcgattgcccgcgcgatcctgcgcgacgctccgatcctgatc
ctcgacgaagccactgcggcgctggacaacgaatccgagcgcctggtgcaggatgcgctg
cagcgcctgatgccggaacgcaccacgctggtcatcgcgcaccgcctgtcgaccatcgag
catgccgaccaggtgctggtgatggaccatggccgcatcgttgaacgcggcacccacaag
gagctgctcgagctgggcggcctgtaccagcatctgcatagcatgcagttccgcgaaagg
caggactga
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