Stenotrophomonas sp. WZN-1: CCR98_08300
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Entry
CCR98_08300 CDS
T04963
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCR98_08300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sten03019
]
CCR98_08300
Enzymes [BR:
sten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CCR98_08300
Messenger RNA biogenesis [BR:
sten03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CCR98_08300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF6448
Motif
Other DBs
NCBI-ProteinID:
ARZ74170
LinkDB
All DBs
Position
1745180..1746559
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AA seq
459 aa
AA seq
DB search
MGNPETSTGSANIISSATSPFSLRVIPRDQHTISRKDISPNALRVLYRLRDAGFGAYLVG
GAVRDLLVNGQPKDFDVATDATPEQVKQLFRNCRLIGRRFRLAHVVFGREIIEVATFRAN
SDDGSGDREMENGMLVRDNVYGTIEDDAIRRDFTCNALYYAIEDFSVRDYTGGFEDVQAR
LMKLIGDPEQRYREDPVRMLRAVRLAAKLGFQIEEGTATPIPHLAGLLNEAAPARLFEEV
LKLFLSGHGVASFEGLERYGLLDVLFPESAKALKANRTGALRRMLVEGLANTDARVANDE
PVSPAFLFALLLWPAFCRAQATLLKQGVAPEEAQRRAADRVTVQQLSTIALPRRFSLPMQ
EIWLLQSRFSSRQRKRVFRTLTHPRFRAAFDFLSLRQVASSEHAADVEFWREAQAQSGRE
LESSLDAMHSEDGDDESGAPRKRRRRRRRPGAPAGATGE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgggcaatcccgaaacttcaaccggaagcgccaacatcatttcctctgctacatcaccg
ttcagcctgcgcgtcatcccgcgcgaccagcacacgatctcccgcaaggacatcagcccg
aacgccctgcgcgtgctttatcgcctgcgcgatgccggcttcggcgcctaccttgtcggc
ggcgcggtgcgcgatctgctggtcaatggccaacccaaggatttcgacgtggccaccgac
gccacgcccgagcaggtcaagcagttgttccgcaactgccgcctgatcggccgccggttc
cgcctcgcccatgtggtgttcggccgcgagatcatcgaagtcgccaccttccgtgccaac
agcgatgacggcagcggcgaccgcgagatggaaaacggcatgctcgtgcgcgacaacgtg
tacggcaccatcgaagacgacgccatccgccgcgacttcacctgcaacgccctgtactac
gccattgaggacttctcggtgcgcgactacaccgggggcttcgaggacgtgcaggcgcgc
ctgatgaagctgatcggcgacccggagcagcgttaccgcgaagatccggtgcgcatgctg
cgtgcggtgcgcctggcggccaagctcggcttccagatcgaagagggcactgccacgccg
atcccgcacctggccggcctgctcaacgaagccgcgccggcgcgcctgttcgaggaagtg
ctcaagctgttcctgtccgggcatggcgtggccagcttcgaaggccttgagcggtacggc
ctgctcgacgtgctgttcccggaaagcgccaaggcgctgaaggccaaccgcaccggcgcg
ctgcgccgcatgctggtcgagggcctggccaacaccgatgcgcgcgtggccaacgacgaa
ccggtgtcgccggcgttcctgttcgcgctgctgctgtggccggcgttctgccgtgcacag
gcgaccctgctcaagcagggcgtcgcacctgaagaggcgcagcgccgcgccgccgaccgc
gtcaccgtgcagcagctcagcaccatcgcgctgccgcgccgcttctcgctgccgatgcag
gaaatctggctgctgcagtcgcgcttcagctcgcgccagcgcaagcgcgtgttccgtacc
ctgacccatccgcgcttccgcgccgcgttcgatttcctcagcctgcgccaggtggcttcg
tccgagcacgctgccgatgtcgaattctggcgcgaagcgcaggcgcaatccggtcgtgaa
ctggagtcgtcgctggatgcgatgcacagcgaagacggcgatgatgaaagcggggcaccg
cgcaagcgccgccgtcgccgccgccgtccgggcgccccggccggtgcaacgggcgagtaa
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