Stenotrophomonas sp. WZN-1: CCR98_08410
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Entry
CCR98_08410 CDS
T04963
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten00020
Citrate cycle (TCA cycle)
sten00190
Oxidative phosphorylation
sten00650
Butanoate metabolism
sten00720
Other carbon fixation pathways
sten01100
Metabolic pathways
sten01110
Biosynthesis of secondary metabolites
sten01120
Microbial metabolism in diverse environments
sten01200
Carbon metabolism
Module
sten_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sten_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sten_M00149
Succinate dehydrogenase, prokaryotes
sten_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CCR98_08410
00650 Butanoate metabolism
CCR98_08410
09102 Energy metabolism
00190 Oxidative phosphorylation
CCR98_08410
00720 Other carbon fixation pathways
CCR98_08410
Enzymes [BR:
sten01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CCR98_08410
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Thi4
Pyr_redox_2
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ARZ74192
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Position
1765956..1767746
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AA seq
596 aa
AA seq
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MSAYKITEHKYDMVVVGAGGAGLRATFGLAAKGLQTVCLTKVFPTRSHTVAAQGGISAAL
ANMGEDDWRYHFFDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTAEGKIYQR
PFGGMTTKYGEGPAAQRTCAAADRTGHAMLHTLYQQSLKHDARFMIEYFALDLIFDEEGA
CRGVLALDMSDGTLHLFRAQGVVLATGGYGRAYFSATSAHTCTGDGGGLAMRAGIAMQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSSGERFMERYAPHYKDLASRDVVSRSMTIE
IREGRGVGEHKDHILLDLTHLGPGVIDEKLPGIAESARIFAGVDVHKQPIPVIPTVHYNM
GGIPTNYHGEVVQKVGDNDNAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETIKPGASHKPLPADACDKALGLLDKLRHANGDTPTSVIRDRMQRTMQADAAVFRTS
QTLKEGCEKMDKIFDSFQDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHAHEDFPDRDDVNWQKHTLVSVDEKGKCSFDYRPVHMYTLTDDVSVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacaagatcaccgaacacaagtacgacatggtcgtggtcggcgccggcggt
gccggcctgcgcgccacgttcggcctggccgccaagggcctgcagaccgtgtgcctgacc
aaggtcttcccgacccgttcgcacaccgttgccgcccagggcggtatctcggccgcactc
gccaacatgggcgaggacgactggcgctaccacttcttcgacaccatcaaggggtcggac
tggctgggcgaccaggacgccatcgaatacatgtgccgtgaggccatcccggccatcatc
gagctcgagcactacggcgtgccgttctcgcgcaccgccgaaggcaagatctaccagcgt
ccgttcggtggcatgaccaccaagtacggcgaaggcccggcggcgcagcgtacctgcgcg
gcggccgaccgtaccggccacgcgatgctgcacaccctgtaccagcagtcgctgaagcac
gatgcgcgcttcatgatcgagtacttcgcactcgacctgatcttcgatgaagaaggcgcc
tgccgcggtgtgctggccctggacatgtccgacggcacccttcacctgttccgtgcccag
ggcgtggtgctggccaccggcggctacggccgtgcctacttcagcgccacctcggcgcac
acctgcaccggcgacggtggcggcctggccatgcgtgccggcatcgccatgcaggacatg
gagttcgtgcagttccacccgaccggcatctacggcgccggctgcctgatcaccgagggt
gtccgcggtgaaggcggcatcctgcgcaacagcagtggcgagcgcttcatggagcgttac
gcaccgcactacaaggacctggcctcgcgcgacgtggtcagccgttcgatgaccatcgag
atccgcgaaggccgcggcgtcggcgagcacaaggaccacatcctgctcgacctgacccac
ctcggcccgggcgtgatcgacgagaagctgccgggtatcgctgaaagcgcccgcatcttc
gccggcgtcgacgtgcacaagcagccgattccggtcatcccgaccgtgcactacaacatg
ggcggcattccgaccaactaccacggcgaagtggtgcagaaggtcggtgacaacgacaat
gccgtggtgccgggcctgtacgccatcggtgaagcggcctgcgtgtccgtgcacggcgcc
aaccgcctgggctcgaactcgctgctggacctggtggtgttcggtcgtgcggtggctaac
cgctgcgccgagaccatcaagccgggcgcgtcgcacaagccgctgccggccgatgcctgc
gacaaggcgctgggcctgctggacaagctgcgccacgccaacggcgataccccgacctcg
gtcatccgcgatcgcatgcagcgcaccatgcaggccgacgcggcggtcttccgcaccagc
cagacgctgaaggaaggctgcgagaagatggacaagatcttcgactcgttccaggacgtg
aaggtctccgaccgttcgctggtctggaactcggacctgatcgagacctacgagctgaac
aacctgctgctcaacgcggtggcgacgatcaactcggccgaacagcgcaaggaaagccgc
ggcgcgcatgcgcacgaggatttcccggaccgcgacgacgtcaactggcagaagcacacc
ctggtcagcgtcgacgagaagggcaagtgcagcttcgactaccgtccggtgcacatgtac
acgttgaccgacgacgtgtccgtggtgccgccgaagccgcgcgtgtactga
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