Stenotrophomonas sp. WZN-1: CCR98_08540
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Entry
CCR98_08540 CDS
T04963
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sten03400
]
CCR98_08540
Enzymes [BR:
sten01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CCR98_08540
DNA repair and recombination proteins [BR:
sten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CCR98_08540
Prokaryotic type
CCR98_08540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ARZ74217
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All DBs
Position
1790592..1792007
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AA seq
471 aa
AA seq
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MSVALVWFRRDLRLQDNPALQAALDAGHDVVPVYIHAPHEEGEWVPGAASDAWRHRSLGA
LDTDLRARGSSLVLRSGDSLPSLQLLIEQTGAEAVYWNRKYEPATQPRDATIKRTLREQG
IDAQSCNGSLLFEPWDIATQQGQPYKVFTPYWRNVLSHWCLPALTAAPKALTPHTVDSLT
LDELRLAPTLAWDTGFWEHWQPGEAGALEALSVFEDGALRGYREQRDLPDRVGTSRLSPH
LHFGEIAPWRIAHALEGLRSAGTDADIDGYLRQLGWRDFAYHLLHHFPKTPTDNLNPRFD
RFPWATPSAAQLHDWQRGNTGVPIVDAGLRELWCTGYMHNRVRMIVASYLCKHLRAHWLH
GARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQARYISRWVPE
LAALPVKARFAPWQHPLLLAAHAPGYPRTPLVDLAVGRDAALAAYRQTGAG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtagcgttggtatggttccgccgtgatctgcggctgcaggacaatccggccctg
caggccgccctggatgcgggccacgacgtggtgccggtctacatccatgcgccgcacgag
gaaggcgagtgggtgcccggtgcggcctccgatgcgtggcgccaccgttcactgggcgca
ctggacaccgacctgcgcgcgcgcggctcttcgctggtgctgcgcagcggtgacagcctg
ccgtcgctgcagctgctgatcgagcagaccggcgccgaagcggtgtactggaaccgcaag
tacgaaccggccacccaaccacgcgacgccaccatcaagcgcacgctgcgcgagcagggc
atcgacgcgcagagctgcaatggcagcctgctgttcgagccctgggacatcgcgacccag
caagggcagccgtacaaggtattcaccccgtactggcgcaatgtactcagtcattggtgc
ctgccggcgcttacggccgcaccgaaggcactgacgccgcacacggttgacagcctcaca
ttggacgaactgcggctagcgcccacgctggcttgggacaccggcttctgggagcactgg
cagccgggcgaagctggtgcactggaagcactgtccgtgttcgaggacggcgcattgcgc
ggttaccgcgaacagcgcgacctgccggatcgcgtggggacctcgcggctgtcgccgcac
ctgcatttcggcgagatcgcgccgtggcgcatcgcgcatgcgctggaagggctgcgcagt
gcgggcaccgacgccgacatcgacggttacctgcgccagctcggctggcgtgatttcgcg
taccacctgctgcatcatttcccgaagacgccgaccgacaacctcaacccgcgctttgac
cgcttcccgtgggccacgccgagtgccgcgcagctgcacgattggcagcgtggcaacacc
ggcgtgccgatcgtcgatgccggcctgcgcgagctgtggtgcaccggctacatgcacaac
cgggtgcggatgatcgtggccagctacctgtgcaagcacctgcgcgcgcactggctgcat
ggcgcgcgctggttctgggacactctggtcgatgccgacctggccaacaacacgatgggc
tggcagtgggtggccgggaccggtgccgatgccgcgccgtacttccgcgtgttcaacccg
gtcacccaggccgagaagttcgatccgcaggcccgttacatcagccgctgggtgcccgaa
ctggcggcgctgccggtgaaggcgcgcttcgcgccgtggcagcatccactgctgctggcc
gcgcatgcccctggctatccacgcaccccgttggtggacctggcggtcggtcgggatgcc
gcgctggccgcttaccggcagacgggggcagggtaa
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