Stenotrophomonas sp. WZN-1: CCR98_08945
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Entry
CCR98_08945 CDS
T04963
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sten03032
]
CCR98_08945
03036 Chromosome and associated proteins [BR:
sten03036
]
CCR98_08945
03400 DNA repair and recombination proteins [BR:
sten03400
]
CCR98_08945
DNA replication proteins [BR:
sten03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CCR98_08945
Chromosome and associated proteins [BR:
sten03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CCR98_08945
DNA repair and recombination proteins [BR:
sten03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CCR98_08945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
PTS-HPr
Motif
Other DBs
NCBI-ProteinID:
ARZ74294
LinkDB
All DBs
Position
1880620..1880925
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AA seq
101 aa
AA seq
DB search
MTKSELIEILARRQAHLKADDVDLAVKSLLEMMGGSLSAGDRIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSSVLPLDADPA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgaactgatcgaaatccttgcgcgccgccaggcgcacctgaaggccgat
gatgtcgatctggcggtgaagtcgttgctggaaatgatgggcggatcgctgtccgccggg
gatcgcatcgaaatccgtggttttggcagcttctcgctgcactatcgtccgccgcgcctg
ggccgcaacccgaagaccggcgaatcggttgccctgccgggcaagcatgtcccccatttc
aagccgggcaaggaactgcgcgagcgggtcagcagtgtgctgccgctggacgccgatccg
gcctga
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integrated database retrieval system
