Stenotrophomonas sp. WZN-1: CCR98_09790
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Entry
CCR98_09790 CDS
T04963
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CCR98_09790 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sten01007
]
CCR98_09790 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sten03016
]
CCR98_09790 (lysS)
Enzymes [BR:
sten01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CCR98_09790 (lysS)
Amino acid related enzymes [BR:
sten01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CCR98_09790 (lysS)
Transfer RNA biogenesis [BR:
sten03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CCR98_09790 (lysS)
Prokaryotic type
Other AARSs
CCR98_09790 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
SH3_AEBP2_C
DUF2800
Motif
Other DBs
NCBI-ProteinID:
ARZ74456
LinkDB
All DBs
Position
2068140..2069651
Genome browser
AA seq
503 aa
AA seq
DB search
MSEATDTPPVDENKLIAERREKLKALRGQGIAYPNDFRREDFAGRLQEEFADAEQWTAEA
LEGNGRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQGAALGDAYTAFKGWDVGDII
AVEGGLTRTKTGELSVKAESIRLLTKSLRPLPDKWHGLADVEQRYRQRYVDLIVTPESRA
VFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLYLRVAPEL
YLKRLTVGGLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVA
TTVNGSTEVEWDGAKIDLGPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLNIRV
KPSYGWGKLLLEIFEATVEHTLIQPTFITDHPVEVSPLARANDNDPGYTDRFELFVNGKE
LANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPTGGLGIGVDRL
VMLLTGSSSIRDVLLFPYMRPEQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagctaccgataccccccccgtcgacgaaaacaagttgatcgccgagcgccgt
gagaaactcaaagcgctgcgtgggcagggcatcgcgtacccgaacgacttccgtcgcgag
gacttcgccggccgcctgcaggaagaattcgccgacgcggaacagtggaccgccgaggcc
ctggaaggcaacggccgccaggtgaagatggcgggccgcctgatggccaagcgcatcatg
ggcaaggccagcttcgcgcagatccaggacgagtccggccgcatccagctgttcctgcag
ggtgcggcgctgggcgatgcctacactgccttcaagggctgggacgtgggcgacatcatc
gccgtcgaaggcggcctgacccgaaccaagaccggcgaactgtcggtcaaggccgaatcg
atccgcctgctgaccaagtcgctgcgcccgttgccggacaagtggcatggcctggccgac
gtcgagcagcgttaccgccagcgttacgtcgacctgatcgtgaccccggagtcgcgcgcg
gtgttcatcaagcgctcgaagatcatccgcgccatgcgcgcgtggctggacaaccgcgac
ttcctggaagtcgagacgccgatgatgcattacatccccggcggcgcggcggccaagccg
ttcaccacccaccacaatgcgctggacctggacctctacctgcgcgtggcgccggagctg
tacctcaagcgcttgaccgtgggtggcctggagcgcgtgtacgagatcaaccgcaacttc
cgcaacgaaggcgtcagcacccgccacaacccggaattcaccatgatggagctgtacgag
gcctatgccacgtacaacgagatcatggacctgaccgaaggcgtgatccgtgacgtggcc
acgacggtcaacggcagcaccgaggtggagtgggatggcgcgaagatcgacctgggcccg
gcgttccgccgctggcgcatggacgaggcggtccgtcaccacaacccggaaatctccgcc
gccgactgcaccgaccgagatgcgctgctgcgccattgcgagcgcttgaatatccgcgtc
aagccgtcctatggctggggcaagctgctgctggagatcttcgaggccactgtcgagcac
accctgatccagccgaccttcatcaccgatcacccggtggaggtctcgccgctggcccgt
gccaacgacaacgatccgggctacaccgaccgcttcgagctgttcgtcaatggcaaggag
ctggccaatggcttctccgagctgaacgatccggaagaccaggcccagcgcttccaggcc
caggtggccgcgaaggaggggggggacgacgaggccatgcattacgatgccgactacatc
cgtgcgctggagtacggcatggccccgaccggcggcctgggcatcggtgtcgatcgcctg
gtgatgctgctgaccggcagcagctcgatccgtgacgtgctgctgttcccgtacatgcgt
ccggagcagtaa
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