Stenotrophomonas sp. WZN-1: CCR98_10070
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Entry
CCR98_10070 CDS
T04963
Name
(GenBank) Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten02020
Two-component system
sten02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCR98_10070
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CCR98_10070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sten03000
]
CCR98_10070
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sten02035
]
CCR98_10070
Transcription factors [BR:
sten03000
]
Prokaryotic type
Helix-turn-helix
Other families
CCR98_10070
Bacterial motility proteins [BR:
sten02035
]
Flagellar system
Flagellar assembly proteins
Others
CCR98_10070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
HTH_50
AAA_19
AAA_30
bpMoxR
AAA
MCM
Motif
Other DBs
NCBI-ProteinID:
ARZ74511
LinkDB
All DBs
Position
complement(2135896..2137398)
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AA seq
500 aa
AA seq
DB search
MSESRILVLDNDAVRAERTVALLEFMDFNPRWVSDAADFDLGRQRQNDWMAVIVGSLDDT
AASTALYHWLGGSSLPPPVLLADGDAAAFAQQHGLHEANIWPLETPLRHAQMEALLRRAS
LKRLDAEHQAGAAQDQGPTGNGPAVTALRTMIEQVAAFDTTVLVLGESGTGKEVVSRAIH
QRSPRRDGPFVAINCGAIPADLLESELFGHEKGAFTGALTARKGRFEMAEGGTLLLDEIG
DMSLPMQVKLLRVLQERSFERVGGNQTIRCNVRVVAATHRDLETRIAEGKFREDLFYRLN
VFPIDVPALRERREDLPALVETIAAQLARTGRGEVRFTPEALQALAGYEWPGNVRELTNL
VERLAVLHPGGSVRVQDLPARYRGDAALAVPAPAPAAPVASEERLDLRSFSFHTPGSGSQ
PALEHGIAVNRAAAPAALPDDGLDLRNHMANIELGLINEALERTQGVVAHAAQLLGLRRT
TLVEKLRKYGIEREQAELAG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaatcgcgcatcctggtgctggacaacgacgccgtgcgcgcagagcgcaccgtt
gccctgctggaattcatggacttcaacccgcgctgggtttccgacgcggccgacttcgac
ctgggccgccagcgccagaacgactggatggcggtgatcgtcggcagcctggacgacacc
gctgccagcactgccctgtaccactggctgggcggcagcagcctgccaccgccggtgctg
ctggccgatggtgatgccgcagcgtttgcccagcagcacgggctgcacgaagccaatatc
tggccgctggaaacgccgctgcgccacgcgcagatggaggccctgctgcgccgtgccagc
ctcaagcgcctggacgccgagcaccaggccggcgccgcgcaggaccaggggccgaccggc
aacggcccggcggtgaccgcgctgcgcaccatgatcgaacaggtggccgcgttcgacacc
accgtgctggtgctgggcgaatccggtaccggcaaggaggtggtgtcgcgcgcgatccat
cagcgctcgccgcgccgcgatggcccgttcgtggcgatcaactgcggcgccattccggcc
gacctgctggagagcgaactgttcggacacgaaaagggcgccttcaccggtgcgctgact
gcgcgcaagggccgtttcgaaatggccgagggaggcaccctgctgctcgacgaaatcggc
gacatgagcctgccgatgcaggtgaagctgctgcgcgtgctgcaggaacgcagtttcgag
cgtgtcggtggcaaccagaccatccgctgcaacgtgcgcgtcgtggccgcgacccaccgc
gacctggaaacccgcatcgccgagggcaagttccgcgaggatctgttctaccgcctcaac
gtgttcccgatcgacgtgcccgccctgcgcgagcgccgcgaggacctgccggcgctggtg
gaaaccatcgccgcgcagctggcccgtaccggccgcggtgaagtgcgcttcaccccggaa
gcgctgcaggccctggccggctacgaatggccgggcaacgtgcgcgagctgaccaacctg
gtcgagcgcctggcggtgctgcatcccggtggttcggtgcgcgtgcaggacctgccggcg
cgctatcgtggcgatgcggcgctggccgtcccggcaccggcgccggcggccccggtcgcc
agcgaagagcgcctggacctgcgcagcttctcgttccatacccctggcagcggcagccaa
ccagcgctggagcacggcatcgcggtcaatcgcgccgccgccccggcggcactgcccgac
gacggcctggacctgcgcaaccacatggccaacatcgaactgggcctgatcaacgaagca
ctggagcgcacccagggcgtggtcgcccatgccgcccagctgctcggcctgcgccgcacc
accctggtggaaaagctgcgcaagtacggcatcgaacgcgagcaggccgaactggccggc
tga
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