Stenotrophomonas sp. WZN-1: CCR98_13495
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Entry
CCR98_13495 CDS
T04963
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CCR98_13495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sten03400
]
CCR98_13495
Enzymes [BR:
sten01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CCR98_13495
DNA repair and recombination proteins [BR:
sten03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CCR98_13495
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCR98_13495
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CCR98_13495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
HEAT_2
Motif
Other DBs
NCBI-ProteinID:
ARZ75140
UniProt:
A0A1Z2LLD6
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All DBs
Position
2843849..2845288
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AA seq
479 aa
AA seq
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MAGSFLFYDLETFGQDPRRTRISQYAAIRTDADLNEIDTPVSFFVRPADDLLPSPMATLV
TGITPQQALAEGISEAEAFDRINEQLSRPGTCALGYNTLRFDDEFVRYGLFRNFHDPYER
EWRNGNSRWDLLDMLRLMRAMRPDGIQWPLREDGATSFKLEHLAEANNVREGDAHEALSD
VRATIGMARLFKQSQPRLWDYALKLRDKRFVGGLLDVAAMKPVLHISMRYPASRLCAAPV
LPLAVHPTINNRVIVFDLEGGIDDLLELPAEVIAQRLYMRASELPEGVARVPLKEVHLNK
VPALIAWNHLRADDHARLGLDVAAIEAKVERLRAFAPQLAEKARQVYNQPRAATVADVDA
SLYDGFLGNGDKPLLALARTTAPEQLAALEGRFRDPRLPELLFRYRARNHPDSLVPAERQ
RWQDYRRQRLLGDGGLGELNLPQYQQQLDALAAEAPDDTRRQALLQALRDWGQHLQETL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagcttcctgttctacgacctggaaaccttcggccaggacccacggcgcacc
cgcatctcgcaatacgccgcgatccgtaccgacgccgacctcaacgaaatcgacaccccg
gtcagcttcttcgtgcgcccggccgatgacctgctgccctcgccgatggccaccctggtc
accggcatcaccccgcagcaggccctggccgagggcatcagcgaggccgaggccttcgac
cgcatcaacgagcagctgtcgcgccccggcacctgcgcgctgggctacaacacgctgcgc
ttcgacgatgaattcgtccgctacggcctgttccgcaacttccacgacccgtacgagcgc
gagtggcgcaacggcaattcgcgctgggatctgctggacatgctgcggctgatgcgcgcg
atgcgcccggacggcatccagtggccgctgcgcgaggatggcgccacctcgttcaagctc
gagcacctggccgaggccaacaacgtgcgcgagggcgatgcccacgaagcgctgtccgac
gtccgtgccaccatcggcatggcacgcctgttcaagcagtcgcagccgcgcctctgggac
tacgcgctgaagctgcgtgacaagcgtttcgtcggcggcctgctggacgtggctgcgatg
aagccggtgctgcacatctccatgcgctacccggccagccgcctgtgcgcggcaccggtg
ctgccgctggccgtgcacccgaccatcaacaaccgggtgatcgtgttcgacctggaaggc
gggatcgacgacctgctggaactgccggccgaggtgatcgcgcagcgcctgtacatgcgc
gccagcgagctacccgaaggcgtggcgcgggtgccgctgaaggaagtgcacctgaacaag
gtgccggcgctgatcgcctggaaccacctgcgcgccgatgaccacgcgcgcctcggcctg
gacgtggccgcgatcgaggccaaggtggaacgcctgcgcgcgttcgccccacagctggcc
gagaaggcccggcaggtctacaaccagccccgcgccgccaccgtggccgacgtcgatgcc
tcgctgtacgacggcttcctcggcaatggcgacaagccgctgcttgcactggcacgcacc
accgcgccggagcagctggccgcgctggaaggccgcttccgcgacccgcgcctgccggag
ctgctgttccgctaccgcgcacgcaaccatcccgacagcctcgtgccggcggaacgccag
cgctggcaggattaccgccgccagcgcctgctcggcgacggcgggctgggcgaactcaac
ctgccccagtaccagcagcagctcgatgcactggccgccgaagcgcccgacgacacgcgg
cgccaggccctgctgcaagcgctgcgcgattggggccagcacctgcaggagacactgtga
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