Stenotrophomonas sp. WZN-1: CCR98_13975
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Entry
CCR98_13975 CDS
T04963
Name
(GenBank) 23S rRNA pseudouridylate synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sten03009
]
CCR98_13975
Enzymes [BR:
sten01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CCR98_13975
Ribosome biogenesis [BR:
sten03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CCR98_13975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ARZ75232
LinkDB
All DBs
Position
2954881..2956515
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AA seq
544 aa
AA seq
DB search
MSDTPRNKLSLKREATSEQFKLEERLHKVLAQAGLGSRRALEQRIAEGLVKVNGEIAQTG
MSVKSGDKIELDGRGFVATALAEPSRVLVYNKPEGEVTTRDDPEGRPTVFESLPPLKGAR
WIAIGRLDINTTGLLLATTDGELANAMMHPSFEVEREYVVRVRAPEGEEKVSDAIVDRLT
RGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRTRYGK
VSLPRELARGHSVELGTAQVEALRAQLKLEEGAPSALTLQPVIGQRRAAKTTVRVREGGR
GNAYVNGHNTADEGRELRRFDNVREDRGRGRGGKGGGFKGGLTVSGEAAAKQSQKPFKQR
AQKNDRSLPEGNPAAFRTWYVPDGVSTGPSGHRNAGPGARGPGARGPGAGGQGRPYGKPK
GPGAGAGGGQGRGGFGGEGRGGAGSQGRPAGAGNRSQGQGNKHPYGHPGNAPSFPSDHAT
PGFNPYGSPKPAQGARPGGRGPGGGNRGPGGNRGPGGPGGNRGPGGPGGNRGPGGPRRSG
PRGG
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgtaacaagctctcgctgaagcgcgaagccacctccgaacagttc
aagctggaagagcgcctgcacaaggtgctggcccaggccggcctcggctcgcgccgcgcg
ctggaacagcgcatcgccgaaggcctggtcaaggtcaacggtgaaatcgcgcagaccggc
atgtcggtcaagagcggcgacaagatcgaactggatggccgtggcttcgtcgccaccgcc
ctggccgagccttcgcgcgtgctggtctacaacaagccggaaggcgaagtaaccacccgc
gatgatccggaaggccgcccaaccgtgttcgagtcgctgccgccgctgaagggcgcgcgc
tggatcgccatcggccgcctggacatcaacaccaccggcctgctgctggccaccaccgac
ggtgagctggccaacgccatgatgcacccgtcgttcgaggtcgagcgcgagtacgtggtg
cgcgtgcgtgcgccggaaggcgaggaaaaggtctccgacgccatcgtcgatcgcctcacc
cgtggcgtcgcgctggaagacggcccggccaagttcgatgagatcgaacgcatcggcggc
accgattcgcacgactggttccgcgtcgtggtgaaggaaggccgcaaccgcgaagtgcgc
cgcctgtgggaatcgcagggctgccaggtcagccgcctgaagcgcacccgctatggcaag
gtgagcctgccgcgtgaactggcccgtggccattcggtggaactgggcactgcacaggtt
gaagccctgcgcgcgcagctgaagctggaagaaggcgcaccgtcggcactgaccctgcag
ccggtgatcggccagcgccgcgccgccaagaccaccgtgcgcgtgcgcgaaggtggccgt
ggcaacgcctacgtcaacggccacaataccgctgacgaaggccgcgagctgcgtcgtttc
gacaacgtccgcgaagaccgcggccgtggtcgcggtggcaagggtggcggcttcaagggc
ggcctgacggtcagcggtgaagcggcagccaagcagtcgcagaagccgttcaagcagcgc
gcccagaagaacgatcgttcgctgccggaaggcaatccggcggcgttccgcacctggtac
gtgccggatggcgtgagcaccggcccgagcggccatcgcaacgccggtccgggcgcacgc
ggccccggtgcccgtggtccgggtgcaggcggccagggccgtccgtacggcaagccgaag
ggtccgggcgctggcgccggtggcggccagggccgaggcggtttcggtggtgaaggccgt
ggcggcgcaggcagccagggtcgtccggccggtgcgggcaaccgctcgcagggccagggc
aacaagcacccgtacggccatccgggcaatgccccgagcttcccgtccgaccacgccacg
ccgggcttcaacccgtatggcagccccaagcctgcacagggcgcccgtccgggcggtcgc
ggtccgggcggtggcaaccgtggtccgggcggtaatcgcggtcccggtggtccgggtggc
aaccgtggcccgggtggccccggcggcaaccgcggtcccggcggcccgcgccgcagcggc
ccgcgcggcggctga
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