Stenotrophomonas sp. WZN-1: CCR98_14615
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Entry
CCR98_14615 CDS
T04963
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sten03016
]
CCR98_14615
Enzymes [BR:
sten01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CCR98_14615
Transfer RNA biogenesis [BR:
sten03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCR98_14615
Prokaryotic type
CCR98_14615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ARZ75348
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All DBs
Position
complement(3075536..3076444)
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AA seq
302 aa
AA seq
DB search
MTRIQFRRLDGILLLDKSTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEIVLGQTTDTDDAEGQVLLQRPVPAISTEALQAALAPLTGSIRQ
RAPIYSALKQGGEPLYVKARRGDVIEAPEREVQVHAIEVLEQQPERLRLRVTCGSGTYIR
SLARDLGESLGCGAHISALRRLWVEPFREPAMVTLDQLRAMVEAGDEAGMDALLLPLAAG
LAEYPRVDLDADQAHRFCVGQRQRDLSWPRGLVAVFGPDDAVQGLGQVDDSGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattcagttccgccgcctggatggcatcctgctgctcgacaagtcgaccggc
atgagctccaacgctgccctgcaggtggcgcgccgcctgttccgcgccgagaaggggggg
cataccggcagcctcgacccgctggccaccggcctgctgccgctgtgcttcggtgaggcg
accaagatcgccggcctgctgctgggttcggccaaggcctacgacgccgagatcgtgctc
ggccagaccaccgataccgacgatgccgaaggccaggtgctgctgcagcgcccggtgccg
gcgatcagtaccgaggccctgcaggctgcgttggcgccgctgaccggcagcatccgccag
cgcgccccgatctattcggcgctgaagcagggcggtgaaccgctgtatgtgaaggcccgc
cgcggcgacgtcatcgaagcgcccgaacgcgaggtgcaggtgcacgccatcgaggtgctg
gagcagcagccggaacggctgcggctgcgcgtgacctgcggctcgggtacctacatccgc
agcctggcccgcgatctcggcgaaagcctgggctgcggcgcccacatcagcgccctgcgc
cggctctgggtcgagccgttccgcgagcccgccatggtcacgctggaccagctgcgggcg
atggtcgaggccggtgacgaggccggcatggatgcgctgctgctgccgctggcggccggc
ctggctgaatacccgagggtcgacctggatgccgaccaggcccaccggttctgtgtcggc
cagcgccagcgcgacctgtcctggccgcgcggcctggtggcggtgtttggtccggacgat
gctgtccagggcctgggccaggtcgacgacagtggcctgctggccccgcagcgccgtttc
aacctctga
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