Stenotrophomonas sp. WZN-1: CCR98_14885
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Entry
CCR98_14885 CDS
T04963
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sten03009
]
CCR98_14885
Enzymes [BR:
sten01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CCR98_14885
Ribosome biogenesis [BR:
sten03009
]
Prokaryotic type
ribosomal protein modification factors
CCR98_14885
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
YajR_YAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
ARZ75398
LinkDB
All DBs
Position
complement(3136311..3137672)
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AA seq
453 aa
AA seq
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MSQLNPKVGFVSLGCPKALVDSERILTQLRSEGYDIVPSYDSADVVVVNTCGFIDSAVTE
SLDAIGEAMNQNGKVIVTGCLGKRPEQIREAYPNVLAVSGPQDYQSVMEAVHEALPPKHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHKCSFCIIPSMRGKLVSRPVDEVLREAERLVR
GGVRELLVVSQDTSAYGVDVKYAEKMWRDKAYQTRLKALCEGLSELDAWVRMHYVYPYPH
VDEVVPLMAENRILPYLDIPFQHASPRILRLMKRPGAVEKTLERVQNWRRIAPDITVRST
FIVGFPGETESEFEELLSFLDEAQLDRVGAFAYSPVEGATANDLPDAVPEEVKQERLARF
MEKQAQISAARLEAKIGTVQQCLVDAIEGDIAVARSKADAPEIDGLVHIQNADQVPLRVG
EFVDVEITESDEHDLYGDALPAATRPAFDLKML
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgaaccccaaagtcggcttcgtcagccttggctgcccgaaggccctcgtc
gattccgagcgcatcctcacccagctccgctcggaaggctacgacatcgtcccgtcctac
gattcggccgacgtggtggtggtcaacacctgcggcttcatcgattcggcggtgaccgag
tcgctggatgccattggcgaggcgatgaaccagaacggcaaggtgatcgtcaccggttgc
ctgggcaagcgcccggagcagatccgcgaggcgtaccccaacgtgctggcggtatccggc
ccgcaggattaccagagcgtgatggaagcggtgcatgaagcactgccgcccaagcacgat
ccgttcgtggacctggtgcccgactacggcatcaagctgaccccgcgccactacgcctac
ctgaagatttccgaaggctgcaaccacaagtgcagcttctgcatcattccgtcgatgcgc
ggcaagctggtctcgcgcccggttgacgaggtgttgcgtgaagccgagcgcttggtgcgt
ggtggcgtgcgtgaactgctggtggtttcgcaggacacctcggcctacggcgtggacgtg
aagtacgccgagaagatgtggcgcgacaaggcctaccagacccgtttgaaggcgctgtgc
gaaggactgtccgagctggatgcgtgggtgcgcatgcactacgtctacccgtatccgcac
gtggacgaagtggtgccgctgatggccgagaaccgcatcctgccgtacctggacatcccc
ttccagcatgcgagcccgcgcatcctgcgtttgatgaagcgccccggcgcggtcgagaag
acccttgagcgcgtgcagaactggcgccgtatcgcgccggacatcaccgtgcgttcgacc
ttcatcgtcggcttcccgggcgagaccgagtccgagttcgaagaactgctgtcgttcctc
gacgaagcgcagctggatcgcgtgggcgcattcgcctattcgccggttgagggggcgacc
gccaacgatctgcccgatgctgtgccggaggaagtgaagcaggagcgtctggcccgcttc
atggagaagcaggcacagatctccgccgcgcgcctggaggccaagatcggcaccgtgcag
cagtgcctggtcgatgccatcgagggcgatatcgccgtggcccgctccaaggccgatgcc
ccggagatcgacggcctggtgcacatccagaatgccgaccaggttccgctgcgcgtgggc
gaattcgtcgacgtggagatcaccgagagcgacgagcacgacctgtatggtgacgcgctg
ccagccgctacccgtccggcattcgacctcaagatgctgtga
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