KEGG   Stenotrophomonas sp. WZN-1: CCR98_15405
Entry
CCR98_15405       CDS       T04963                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sten  Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:sten00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sten03400]
    CCR98_15405
Enzymes [BR:sten01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CCR98_15405
    5.6.2.6  RNA 3'-5' helicase
     CCR98_15405
DNA repair and recombination proteins [BR:sten03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CCR98_15405
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ARZ75494
LinkDB
Position
3261028..3263487
AA seq 819 aa
MNRSQALRRLEDWFASKGWRSLPFQRAMWRHYLAGGSGLLHTPTGSGKTMAMFGGPLLQA
MIDPPPPPRRASAVRPLQVLWVTPLRALASDTARALQAVVDGVGLGWRVGLRSGDASNRE
RRQAREGRIDVLVTTPESLALLLSYPDTLPRMRQLRCVVVDEWHELLGSKRGVLLQLNLA
VLREAAPALQLWGLSATLGNLQEARDVLLPGQPDAPIVQGVRPRAISVRSLLPDPGERFP
WAGHLGLAQLPRVLDALMQARSSLLFTNTRAQAELWHQALAAVWPEDPATLALHHGSLDP
VLRQQVEDGLRAGALRCVVATSSLDLGVDFPEVEQVLQLGSPKGVARLRQRAGRARHRPG
ASGSILCVPSHALELAEYAAVRRALAEGVVEARRPPTLSLDVLAQHAVSRALAGGFDSAA
LLAQVRRTHAFASLGDDQWQAVLTFIVQGGQALAQYPDFHKVVRDADGRYRMHDRRQALR
HRLSIGTISSDGSVRVQFLRGGSLGAVEEQFASRLRRGDRFQFAGRLLELVQLRDMTAFV
RLARGRGDGVVPRWQGGQLPLSMPLGRELEWVLSGADDSAESRWLSPLLALQQQLSALPG
PGHLLVEEVRRREGQFLFVYLFAGRHVHEALAALLALRCTRRQRNSIGYAVNDHGLVLAP
AQAIDLDAAEWKALFTTDRLLDDLRAAVNLGELARRQFRGIARVAGLLVPSLPGGMPRSL
RQLQASAGLLFDVLREHDPDHLLLALAEREVLHDSLDLAGLQQVLARIGTQILSMQRPSS
LTPLGFPLWAERLRGQFSNEDWRTRVQRAAQQLERRHGR
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgaaccgcagccaggcactacgccggctggaagactggttcgcgtcgaaaggctggcgc
tcgctgccgttccagcgcgcgatgtggcggcactatctcgccggcggatccgggttgctg
cacacccccacgggcagcggcaagaccatggcgatgttcggcggtccgctgctgcaggcc
atgatcgatccaccgcccccgccccgccgcgccagcgcggtgcgcccgctgcaggtgctg
tgggtgacgcccttgcgcgcattggccagcgacaccgcgcgcgcactgcaggccgtggtt
gatggggtggggcttggatggcgcgtcggcctgcgcagtggtgacgccagcaaccgcgaa
cgacgacaggcgcgcgagggccgcatcgacgtactggtcaccacgccggaatcgttggcg
ctgctgctgagctatccggatacgctgccgcgcatgcgccagctgcgctgcgtggtggtg
gacgaatggcacgagctgctgggcagcaagcgtggagtgctgctgcagttgaacctggcg
gtgttgcgcgaggccgcgcctgcattgcagctgtggggactatcggccacgctgggaaac
ctgcaggaagcgcgcgacgtgctgctgcccgggcagcccgacgcgccgatcgtgcagggc
gtgcgcccgcgcgcaatcagcgtgcgcagtctgctgccggaccccggcgaacgtttcccc
tgggccgggcatctcggcctggcgcagctgccgcgcgtgctggatgcattgatgcaggcg
cgcagcagcctgctgttcaccaacacccgtgcgcaggcagaactgtggcatcaggcgctg
gccgcggtctggccggaagacccggccacgttggcgctgcaccacggctcgctggatccg
gtgctgcgccagcaggtggaagacgggctgcgcgcgggcgcgctgcgctgcgtcgttgcc
acctccagcctcgacctcggcgtggacttccccgaggttgagcaggtactgcagctgggc
agcccgaagggcgtggcgcgcctgcgccaacgcgccggacgcgcacgccatcgtccgggt
gccagcggctcaattctgtgcgtccccagccatgcgctggagctggccgagtacgctgcg
gtacgccgtgcattggccgaaggcgtggtcgaagcacgcaggccaccaacgctgtcgctg
gatgtgctggcccagcatgcggtcagccgcgccctggcgggcggcttcgacagcgccgcg
ctgctggcacaggtaaggcgtacccatgccttcgcgtctctcggcgacgatcaatggcag
gccgtgctcacgttcatcgtgcaaggcggccaggcgctggcccagtaccccgatttccac
aaggtcgtgcgtgatgccgatgggcggtaccgcatgcacgaccgtcgccaggcgctgcgt
catcggctgtcgatcggcaccatcagcagcgatggcagtgtgcgcgtgcagttcctgcgc
ggcggtagcctgggcgccgtggaggagcagttcgccagccgcctgcgccgtggcgatcgc
ttccagttcgccggacgcctgctggagctggtgcagctgcgcgacatgaccgccttcgtg
cggttggcacgagggcgcggtgacggtgtcgtcccccgctggcagggcggccagttgccg
ctgtcgatgccgctcggccgcgagctggagtgggtcctgtccggcgccgacgacagcgcc
gaatcacgctggctgtcccccttgctggcactgcagcagcagttgtcggcgcttcccggc
cctggccaccttctggtggaagaggtgcgacgccgcgaaggccagttcctgttcgtctac
ctctttgccggccgccacgtgcacgaggcgctggccgccttgctggcgctgcgctgtacc
cgccggcagcgcaacagcatcggctatgcggtgaacgatcacggcctggtactggcaccg
gcgcaggcgatcgatctggatgcggcggaatggaaggcgctgttcaccaccgatcggctg
cttgacgatctgcgtgccgcggtgaacctgggcgagctggcgcgccgccagttccgtggc
atcgcgcgcgtagcgggcctgctggtacccagcctgcccggcggcatgccgcgatcactg
cgccagctgcaggcctcggcaggcctgctcttcgacgtgctgcgcgagcacgatcctgac
catctgctgctggcgctggccgaacgcgaggtgctgcacgacagcctcgatctggctggg
ttacagcaggtactggcaaggatcggcacgcagattctctcgatgcagcgtccatcgtca
cttacgccactgggcttcccgttgtgggccgaacgcctgcgtgggcagttcagcaacgag
gactggcgtacccgcgtgcaacgcgcggcccagcagctggagcgtcgccatggccgatga

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