Stenotrophomonas sp. WZN-1: CCR98_15455
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Entry
CCR98_15455 CDS
T04963
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sten03009
]
CCR98_15455
Enzymes [BR:
sten01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CCR98_15455
Ribosome biogenesis [BR:
sten03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CCR98_15455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
RrnaAD
MTS
Methyltr_RsmB-F
Cons_hypoth95
PCMT
Methyltransf_11
TRM5-TYW2_MTfase
TRAM
Methyltransf_23
Methyltransf_15
Methyltransf_12
UPF0020
Methyltransf_32
PrmA
Motif
Other DBs
NCBI-ProteinID:
ARZ75504
LinkDB
All DBs
Position
complement(3270111..3271445)
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AA seq
444 aa
AA seq
DB search
MARSRSRTDRTPFQTEILDLSHDGRGVARREGEGGKVTFVSGALPGEVVMAEQTARSRHF
DEARTVEVLQASPQRVTPKCPHFGTCAGCVLQHLDEDQQIVAKQRVLMDNLERIGHVKPG
TVLAPLVGESWGYRRKGRFSVRRVEKKDKTLVGFREQDPRFVADLSQCLTVIPEIGTKVE
ALSTFIESLDGKRDIPQIEFIAGDQAVVLTVRHLQPLSDADRVAWAAFGQQHGFVIYLQS
GGVDTVQPLDGQGVPLSFRLAPWDVELAFRPLDFIQVNAKLNEKMIAHALDLLEPGEDER
VLDLFCGLGNFTLPLARRVREVVGVEGDAGLVARARENAERNGLANAQFFSADLTQDQRS
TPWMRQGFDKLLLDPPRSGAIEVLQQLPLKQFKRIVYVSCHPGSLARDAGYLVNEQGFTL
VSAGAMDMFPHTAHVESIAVFEKR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgatcccgttcccgcaccgaccgtaccccattccagaccgagatcctcgacctc
agccatgatggtcgcggtgtcgcccgccgtgaaggcgagggcggcaaggtcaccttcgtc
agtggcgcgctgcccggcgaggtggtgatggctgaacagaccgcccgcagccgccatttc
gacgaggcgcgcaccgtggaggtgctgcaggcctcgccgcagcgggtgacccccaagtgc
ccccatttcggtacctgcgccggttgcgtgctgcagcacctggacgaggaccagcagatc
gtcgccaagcagcgcgtgctgatggacaacctggagcggatcggccatgtgaagccgggt
accgtgctggcgccgctggtcggtgagagctggggctaccgccgcaagggccgcttctcg
gtgcgccgggtcgagaagaaggacaagaccctggtcggcttccgtgaacaggatccgcgc
ttcgtcgccgacctcagccagtgcctgaccgtgatccccgagatcggcaccaaggtcgag
gcgctgtccaccttcatcgagtcactcgatggcaagcgtgacatcccgcagatcgaattc
atcgctggtgaccaggccgtggtcctgaccgtgcgccatctgcagccgctaagcgatgcc
gaccgcgtggcctgggcggccttcggccagcagcatggcttcgtgatctacctgcagtcc
ggtggcgtggacaccgtgcagccgctggacgggcagggcgtgccgctgtcgttccgtctg
gcgccgtgggatgtcgaactggcgttccgcccgctggacttcatccaggtcaatgccaag
ctcaacgagaagatgatcgcccacgccctggacctgctggaaccgggcgaggacgagcgc
gtgctggacctgttctgcggcctgggcaacttcaccctgccgctggcccgccgcgtgcgc
gaagtggtcggtgtggaaggcgatgccggcctggtcgcgcgtgcgcgtgagaacgccgag
cgcaatggcctggccaacgcgcagttcttcagcgccgacctgacccaggaccagcgcagc
actccgtggatgcgccagggcttcgacaagctgctgctggacccgccgcgctcgggcgcg
atcgaagtgctgcagcagctgccgctgaagcagttcaagcgcatcgtctacgtcagctgc
caccccggctcgctggcgcgcgatgccggctacctggtcaacgaacagggcttcaccctg
gtcagcgccggtgcgatggacatgttcccgcacaccgcgcacgtggaaagcatcgcggtg
ttcgagaagcgctga
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