Stenotrophomonas sp. WZN-1: CCR98_15765
Help
Entry
CCR98_15765 CDS
T04963
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sten03000
]
CCR98_15765
Transcription factors [BR:
sten03000
]
Prokaryotic type
Helix-turn-helix
Other families
CCR98_15765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
AAA_5
Mg_chelatase
HTH_8
AAA_16
HTH_23
HTH_Tnp_1_2
Hydrolase
HTH_17
AAA_2
ATPase
HTH_11
AAA
ketoacyl-synt
HVO_A0261_N
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ARZ75562
LinkDB
All DBs
Position
3345026..3346609
Genome browser
AA seq
527 aa
AA seq
DB search
MYLPRSPLRHADADPGRPVIWTVSVSRLTGLLGDVIPEFDRRARIEQINLGFEEAVEVIG
QRLRREHCDVVIAGGSNAAWLRGRLELPLVPIQANGFDLMEALARARRIASRIGLVTHAS
DVPVFSNFQQSFGLDIEHRRFVTREDARDCIADLRANGIEVIVGTGMAIDHAEQAGLPGV
LLYSADSVRQAFEHALELTQTLARSGSNRPAPRRRPAARADAHELLGDSDAMAQVRAQIA
LYAPHDSTVLVSGETGTGKELVARQLHAASGRRGRFVALNCGAISESLLEAELFGYSDGA
FTGARRGGRVGLVEAADGGTLFLDEIGELPLPLQTRLLRVLEEREVLRVGATEPTPVDLR
VVAATLQSLEQRAAVGSFRRDLYYRLAALRIALPSLRARRGDIPLLAQHFFRQLRGIDAP
LDEDALAVLTAAEWPGNVRELRNLVDRLRIHWQPGEGLIDAARLLQLAPELVNEGVAALT
VESNGKRPPRAQLETLLQEHRNDREGMAQALGVSRTTLWRWLRAEGL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgccccgctcacccctgcgccatgccgatgccgaccccggccgcccggtgatc
tggacggtcagcgtctcgcggctgactggcctgctcggcgacgtcattcccgagttcgac
cgccgcgcgcgcatcgagcagatcaatctcggcttcgaggaagcggtggaggtgatcggc
cagcgcctgcgccgcgagcattgcgatgtggtgattgccggcggctccaacgccgcctgg
ctgcgcggccggctggagctgccgctggtgccgatccaggccaacggcttcgacctgatg
gaagcactggcccgtgcccgccgcatcgccagccgcatcggcctggtcacccacgccagc
gacgtgccggtgttcagcaacttccagcagagtttcggcctggatatcgagcatcgccgt
ttcgtcacccgcgaggacgcgcgcgactgcatcgccgatctgcgcgccaacggcatcgaa
gtgatcgtcggcaccggcatggccatcgaccatgccgagcaggccgggctgcccggggtg
ctgctgtattcggccgactcggtgcggcaggcgttcgaacatgcgctggaactgacccag
accctggcacgttccggcagcaaccgccctgccccgcgccggcgcccggcagcgcgtgcc
gatgcgcatgaactgctcggcgacagcgacgcgatggcgcaggtgcgcgcgcagatcgcg
ctctacgccccacatgacagcaccgtgctggtcagcggcgaaaccggcaccggcaaggaa
ctggtggcgcgccagctgcacgccgccagcggtcgtcgcggacgcttcgtggcactgaac
tgcggcgcgatcagcgaatcgctgctggaagcggagctgttcggctacagcgatggcgcc
ttcaccggcgcacgccgtggcggccgcgtcggcctggttgaagccgcagacggcggtacg
ctgttcctggatgagatcggcgaactgccgctaccactgcagacccgcctgctacgtgtg
ctggaggaacgtgaagtgctgcgtgtgggtgccaccgaaccgacaccggtggacctgcgc
gtggtcgccgccaccctgcagtcgctggagcagcgcgcggccgtcggcagcttccgccgc
gacctgtactaccgcttggcagcgctacgcattgccctgccctcgctacgtgcccggcgc
ggtgacatcccgctgctggcacaacatttcttccgccagctgcgtggcatcgacgcgcca
ttggatgaggatgcgctggcggtgctgaccgccgccgagtggccaggcaacgtgcgtgag
ctgcgtaatctggtggatcgcctgcgcatccactggcagccaggagaaggcctgattgat
gccgcgcgactgctgcagctggcacccgagcttgtgaatgaaggtgtcgcggcattgacg
gtggaaagcaacggcaagcggccaccgcgtgcgcagctggaaacactgctgcaggaacac
cgcaatgaccgcgaggggatggcgcaggcgctgggcgtctcacgcaccacgctatggcgc
tggctgcgcgcggagggcttgtaa
DBGET
integrated database retrieval system
