Stenotrophomonas sp. WZN-1: CCR98_16270
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Entry
CCR98_16270 CDS
T04963
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CCR98_16270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sten03400
]
CCR98_16270
Enzymes [BR:
sten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCR98_16270
DNA repair and recombination proteins [BR:
sten03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCR98_16270
RecFOR pathway proteins
CCR98_16270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_3
Mg_chelatase
AAA_22
TIP49
AAA_14
nSTAND3
AAA_33
AAA_2
NTPase_1
Bac_DnaA
TsaE
RNA_helicase
AAA_18
Rad17
NB-ARC
DUF815
AAA_17
AAA_24
AAA_28
Sigma54_activ_2
ABC_tran
DUF87
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ARZ75658
LinkDB
All DBs
Position
complement(3458632..3459672)
Genome browser
AA seq
346 aa
AA seq
DB search
MTDDRIIGAGATREDDAADASIRPKRLADYLGQAPVREQMEIYIEAAKARGDALDHVLIF
GPPGLGKTTLSHVIANELGVALRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPV
VEEVLYPAMEDFQIDIMIGEGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRL
EFYSVEELTRIVRRSAAILAIDCTADGAGEIARRARGTPRIANRLLRRVRDYAQVKAGGH
IDEAVAQAAMKMLKVDPEGFDELDRRLLKTMVDYFDGGPVGIESLAAALSEERGTLEDVV
EPYLIQQGFLVRTARGRMATHKAYRHMGLKPKNPPQDLFAEVPDVG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaccgcatcatcggcgccggcgccacccgcgaggatgacgccgccgacgcc
agcatccgccccaagcgcttggccgactacctcggccaggccccggtgcgcgagcagatg
gagatctacatcgaagcggccaaggcccgtggcgacgcgctcgaccatgtgctgatcttc
ggcccgcccggcctgggcaagaccaccctcagccacgtcatcgccaatgaactgggcgtg
gccctgcgggtcacctccggcccggtgatcgagaaggccggtgacctcgccgcactgctc
accaacctgcagccgcacgatgtgctgttcatcgacgaaatccatcgcctgtcgccggtg
gtcgaggaagtgctgtacccggcgatggaagacttccagatcgacatcatgatcggcgag
ggccctgcggcccgttcgatcaagatcgacctgccgccgttcaccctgatcggcgccacc
acgcgtgccggcctgttgactgcgccgctgcgcgaccgcttcggcatcgtccagcggctg
gagttctacagcgttgaagagctgacccgcatcgtgcgccgatcggcggccatcctggcc
atcgactgcaccgccgatggtgccggcgagatcgcgcgccgcgcgcgcggcaccccgcgt
atcgccaaccgcctgctgcgccgcgtgcgcgactacgcacaggtcaaggccggcggccac
atcgacgaggccgtggcacaggccgcgatgaaaatgctcaaggtcgatccggagggcttc
gacgagctcgaccggcgcctgctcaagaccatggtcgactacttcgatggcggcccggtc
ggcatcgaatcgctggcggcggcgctgtccgaagagcgcggcacgctggaagacgtggtc
gagccctacctgatccagcagggcttcctggtgcgcaccgcgcgcggccgcatggccacc
cacaaggcctaccggcacatgggcctgaagccgaagaacccgccgcaggacctgttcgcg
gaggttcccgatgtcggttga
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