Stenotrophomonas sp. WZN-1: CCR98_17280
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Entry
CCR98_17280 CDS
T04963
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten00730
Thiamine metabolism
sten01100
Metabolic pathways
sten01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CCR98_17280
Enzymes [BR:
sten01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CCR98_17280
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ARZ75850
LinkDB
All DBs
Position
complement(3686537..3688381)
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AA seq
614 aa
AA seq
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MNAQLSALQQQAQQLSESVTRPIPGSRKIHVPGSRPDLQVPMREIALTRTPTLFGGEENA
PVTVYDTSGPYTDPDVRIDLSAGLPALRRGWVEERGDTEQLGGLSSSFGRDREHDPKLDA
VRFPARSLPRRARAGANVTQMHYARRGIITPEMEFVAIRENQRLDAIRDAGLLHQHPGEA
FGASIQKIITPEFVRDEIARGRAVLPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVAIGTVPIYQALEKVDGRAEA
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKE
NFLYTHFEEICEIMKAYDVTFSLGDGLRPGCIADANDAAQFGELETLGELTKIAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYRIAAHAADLAKGHPGAQVRDNALSKARFEFRW
EDQFHLGLDPEKAKEFHDETLPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAEAGMKEKS
EEFRAAGAEVYRQG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacagctctccgccctgcagcaacaggcccagcaactctccgaatccgtaacc
cggccgattcccggttcgcgcaagatccacgtacccggttcgcgtccggatctgcaggtg
ccgatgcgcgagatcgcgctgacccgcacgccgacgttgttcggcggcgaagagaatgca
ccggttacggtctacgacacgtcgggcccctacaccgatccggacgtgcgtatcgatctg
tccgcaggtctgccggcgctgcgtcgcggttgggtggaggaacgtggtgataccgagcag
cttggcggcctgagttcgtcgttcggccgcgaccgcgagcatgatccgaagctcgatgcc
gtgcgtttccctgcgcgcagcctgccgcgccgtgcacgcgcaggggcgaatgtcacgcag
atgcactacgcgcgccgcggcatcatcacgccggagatggaatttgtcgccatccgcgag
aaccagcggctggacgcgatccgcgatgccggcctgctgcaccagcacccgggcgaggca
tttggtgcctcgatccagaagatcatcacgccggaattcgtgcgcgatgagatcgcgcgc
ggccgcgcggtgctgcccaacaacatcaaccatccggaaagcgagccgatgatcatcggc
cgcaatttcctgaccaagatcaatgccaacatcggcaacagcgccgtgtcctcgggcatt
gccgaggaggtggagaaactggtgtgggcgatccgctggggcggtgacacggtgatggac
ctgtccaccggcaagcacatccatgagacccgcgagtggatcatccgcaactcgccggtg
gcgatcggtactgtgccgatctaccaggcgctggagaaggttgatggccgtgccgaagcg
ctcacctgggagatcttccgcgacacgctgatcgagcaggccgaacagggcgtggactac
ttcaccatccacgccggcgtgctgctgcgctatgtgccgctcaccgccaagcgcgtgacc
ggcatcgtcagccgcggtggctcgatcatggccaagtggtgcctggcgcatcacaaggag
aacttcctctacacgcacttcgaagagatctgcgagatcatgaaggcctacgacgtgacc
ttctcgctgggtgacggcctgcgcccgggctgcatcgccgatgccaacgacgcggcgcag
ttcggtgaactggagacgctgggtgagctgacgaagatcgcctggaagcatgatgtgcag
accatgatcgaaggccccggccacgtgccgatgcagctgatcaaggagaacatggacaag
cagctgcgcgagtgcggcgaagcgccgttctatacgctgggaccgctgaccaccgatata
gcaccgggctacgaccacatcaccagcgcgatcggtgcggcgatgatcggctggttcggc
acggcaatgctctgctacgtgacgccgaaggagcacctcggcctgcccaatcgccaggac
gtgcgtgacggcatcatggcctaccgcatcgccgcgcatgcggccgacctggccaagggc
catccgggcgcgcaggtgcgcgacaacgcgctgagcaaggcgcgcttcgagttccgctgg
gaagaccagttccaccttggcctggatccggagaaggccaaggagttccatgacgagacg
ctgccgaaggatgcgcacaagctggcccacttctgctcgatgtgcggcccgcatttctgt
tcgatgaagatcacccaggacgtgcgtgactacgcggaggccggcatgaaggagaagtcg
gaagagttccgcgccgccggcgccgaggtctaccgccagggctga
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