Stenotrophomonas sp. WZN-1: CCR98_18045
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Entry
CCR98_18045 CDS
T04963
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten00300
Lysine biosynthesis
sten00470
D-Amino acid metabolism
sten01100
Metabolic pathways
sten01110
Biosynthesis of secondary metabolites
sten01120
Microbial metabolism in diverse environments
sten01230
Biosynthesis of amino acids
Module
sten_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CCR98_18045
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CCR98_18045
Enzymes [BR:
sten01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CCR98_18045
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Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ARZ75991
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Position
complement(3869330..3870181)
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AA seq
283 aa
AA seq
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MSKAGSKALRFSKMHGAGNDFVVIDLRDGTAPPTPELAARLADRHTGVGCDQILTIEAPR
AEGSVASYRIWNADGSNSEQCGNGARCIAAWLVREGSAQGDAFVIDSPLASHEVKVLGEG
QFAVTMGVPAFEPANVPLMGFAHPREEYLLPLQGESVRFAAVSMGNPHAVIEVGLIDAAP
VERVGALLQQHASFPRSVNVGFAQVMGPAHARLRVFERGVGETLACGSGACAAAVTLMQR
GRLQRDARISLPGGDLRIQWPGDGQPVVMAGPTAFVFEGEWIA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggccggttccaaggccctgcgcttcagcaagatgcacggcgcgggcaatgat
ttcgtagtgatcgacctgcgtgacggcaccgcaccgcccacgcccgagctggccgcacgc
ctggccgaccgccataccggcgtcggctgcgatcagatcctgaccatcgaggcgccgcgt
gcggaaggctcggtggcctcgtaccgcatctggaatgccgacggttccaactccgaacag
tgcggcaacggcgcgcgctgcatcgccgcctggctggtgcgcgagggcagtgcgcagggt
gatgcattcgtcatcgacagcccgctggccagccatgaagtgaaggtgctgggcgagggc
cagttcgcggtgacgatgggcgtgcctgccttcgagccggccaacgtgccgctgatgggg
tttgcacacccgcgcgaggaatatctgctgccgctgcagggcgagagcgtacgcttcgcc
gcggtgtcgatgggcaatccgcatgcggtgatcgaagtaggcctgatcgatgccgcaccg
gtcgagcgcgtcggtgcgctgctgcagcagcatgcgtcgttcccgcgctcggtgaacgtg
ggcttcgcccaggtgatgggcccggcgcacgcccgcctgcgcgtgttcgagcgcggcgtc
ggcgaaaccctggcctgcggcagtggtgcctgtgccgccgcggtgaccttgatgcagcgt
ggccgcctgcagcgcgatgcgcgcatcagcctgcccggtggcgacctgcgcatccagtgg
ccgggcgatggccagccggtggtgatggccggcccgactgcattcgtcttcgaaggggag
tggatcgcatga
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