Stenotrophomonas sp. WZN-1: CCR98_18265
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Entry
CCR98_18265 CDS
T04963
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten00010
Glycolysis / Gluconeogenesis
sten00020
Citrate cycle (TCA cycle)
sten00260
Glycine, serine and threonine metabolism
sten00280
Valine, leucine and isoleucine degradation
sten00310
Lysine degradation
sten00380
Tryptophan metabolism
sten00620
Pyruvate metabolism
sten00630
Glyoxylate and dicarboxylate metabolism
sten00640
Propanoate metabolism
sten00785
Lipoic acid metabolism
sten01100
Metabolic pathways
sten01110
Biosynthesis of secondary metabolites
sten01120
Microbial metabolism in diverse environments
sten01200
Carbon metabolism
sten01210
2-Oxocarboxylic acid metabolism
sten01240
Biosynthesis of cofactors
Module
sten_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sten_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sten_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
sten_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sten_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CCR98_18265 (lpdA)
00020 Citrate cycle (TCA cycle)
CCR98_18265 (lpdA)
00620 Pyruvate metabolism
CCR98_18265 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CCR98_18265 (lpdA)
00640 Propanoate metabolism
CCR98_18265 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CCR98_18265 (lpdA)
00280 Valine, leucine and isoleucine degradation
CCR98_18265 (lpdA)
00310 Lysine degradation
CCR98_18265 (lpdA)
00380 Tryptophan metabolism
CCR98_18265 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CCR98_18265 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sten04147
]
CCR98_18265 (lpdA)
Enzymes [BR:
sten01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CCR98_18265 (lpdA)
Exosome [BR:
sten04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CCR98_18265 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
GIDA
NAD_binding_8
FAD_binding_2
Thi4
HI0933_like
AlaDh_PNT_C
GCV_H
DUF478
RnfC_N
FAD_binding_3
3HCDH_N
DAO
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
ARZ76032
UniProt:
A0A1Z2LPA0
LinkDB
All DBs
Position
complement(3912902..3914710)
Genome browser
AA seq
602 aa
AA seq
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MATIEVKVPDIGDYSDVPVIEVLVAVGDTVKKDQGLVTLESDKATLEVPSSAAGVVKEIK
VKLGDTLSEGAVVVVLDAEGAAEAPAKAAAPAPAAAAPASKPPVTPSHRAPAEPAAPKPA
LSSGKPADIECEMVVLGSGPGGYTAAFRAADVGLDTVLVERYATLGGVCLNVGCIPSKAL
LHAAAVIDEVAHAGDFGVEFGKPTITLDKLREYKEKVVNQLTKGLAGMAKQRKVRSVQGV
GKFVSANELEITAADGSTQLLRFQKCIIAAGSQAVKLPNFPWDDKRVMDSTDALELAEVP
GSLLVVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQGIEVHL
KTKASGVTADAKGITVTFDAAEEGQAPALAQGTFDRVLVAVGRSPNGRKIDAEKAGVQVT
DRGFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGHKKEWVARVIPSV
AYTNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEETHRIIG
GAIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVAMASEIYDGTITDLYMPK
KK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggccacgattgaagtcaaggttcccgacatcggcgattacagcgatgtgccggtgatc
gaagtgttggtcgccgtcggcgacacggtgaagaaggatcagggtctggtgaccctggaa
tcggacaaggcgactctggaagtgccgtcctcggccgccggcgtggtcaaggaaatcaag
gtcaagctgggcgacaccctgtccgaaggcgccgtggtcgtggtgctggacgctgaaggt
gccgccgaagctccggccaaggccgctgcaccggctccggctgcggccgctccggccagc
aagccgccggtgaccccgtcgcaccgcgccccggctgaaccggcggcaccgaagccggcg
ctgtccagcggcaagccggccgacatcgaatgcgagatggtcgtgctgggttccggcccg
ggcggctacaccgccgccttccgcgccgccgacgtcggcctggacaccgtgctggtcgaa
cgctacgccaccctcggcggcgtctgcctcaacgtgggctgcattccgtccaaggcactg
ctgcatgctgctgcggtgatcgacgaagtggcccacgccggtgatttcggcgtcgagttc
ggcaagccgaccatcaccctggacaagctgcgcgagtacaaggaaaaggtcgtcaaccag
ctgaccaagggcctggccggcatggccaagcagcgcaaggtccgcagcgtgcagggcgtc
ggcaaattcgtttcggccaacgagctggagatcaccgccgctgacggcagcacccagctg
ctgcgcttccagaagtgcatcatcgccgccggttcgcaggcggtgaagctgccgaacttc
ccgtgggacgacaagcgcgtgatggattccaccgacgcgctggagctggccgaagtgccg
ggctcgctgctggtcgtcggcggcggcatcatcggcctggaaatggccaccgtgtacagc
gcgctgggcagcaaggtgacggtggtcgagttcatggaccagctgatgccgggcgccgac
aaggacctggtcaagccgttggccgaccgcctgaagaagcagggcatcgaagtgcacctg
aagaccaaggcctcgggcgtcactgccgatgccaagggcatcaccgtgaccttcgacgcc
gccgaggaaggccaggcgcctgcgctggcgcagggcaccttcgaccgcgtgctggtggcc
gtgggccgctcgccgaacggcaggaagatcgatgccgaaaaggccggcgtgcaggtcacc
gaccgtggcttcatcccggtcgatcgccagatgcgcaccaatgtgccgcacatctttgcc
atcggcgacatcgtcggcaacccgatgctggcccacaaggccacgcacgaaggcaagctg
gccgctgaagtggcagccggccacaagaaggaatgggtggcccgcgtgattccgtcggtg
gcctacaccaacccggagatcgcctgggttggcgtgaccgagaccgaagccaaggccaag
ggcctgaaggtcggcgtggccaagttcccgtgggccgccagtggccgcgcgatcggcatc
ggccgcaccgagggcttcaccaagctgatcttcgatgaagagacccaccgcatcatcggt
ggtgccatcgtcggcgtgcatgccggtgacctgctggccgagatcggcctggcgatcgag
atgggtgccgaagctgaagacatcggccacaccatccacgcgcatccgacgctgagcgaa
tcggtggcgatggcctcggagatctacgacggcacgatcaccgatctgtacatgccgaag
aagaagtaa
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