Stenotrophomonas sp. WZN-1: CCR98_18600
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Entry
CCR98_18600 CDS
T04963
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CCR98_18600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sten03400
]
CCR98_18600
Enzymes [BR:
sten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCR98_18600
DNA repair and recombination proteins [BR:
sten03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCR98_18600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
Zn_ribbon_6
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
ARZ76690
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All DBs
Position
3983996..3986173
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AA seq
725 aa
AA seq
DB search
MLSPIPTLQVALPVPLPRLFDYLSPEGDGPAVAVGCRLKVPFGNRELVGVVAGHGQTDDG
QGLRQALAWCDPQPLLQGELWQSLQWLARYTHAPLGEVLSTALPGPLRHGEALPDTHHWG
WQLTPEGHDQRDRLRAGSRPRQLAELLAEAIVDEDVLGERMEDWRTAARSLAKRGLAERV
ALSVAPQHAQPLPGPTLNPEQAEAVAAINTADGFQPFLLDGVTGSGKTEVYLQAIIHCLA
QGKQALVLVPEIGLTPQTLARFRGRLGIAVHALHSGLNDNERARVWAAASRGEARVIVGT
RSAVFTPLPQAGLLIVDEEHDGSYKQQDGIRYHARDFALVRAKSLGIPVLLGSATPSLET
LHNAYAGRYTHLRLKQRAGDARPPRVRILDVRKRPLHDGLSADVLAGIGEHLQRGQQVLV
FKNRRGYAPVLLCHDCGWTAPCQRCDAPMTVHGGGRRLQCHHCGARQPAPLACPACGSLA
LQPQGIGTERLEEHLTAAFADFPVVRIDRGTTSRRDALEQQLAKLGDQPGILVGTQILAK
GHDLPKLTLVVVVGIDEGLFSADFRASEKLAQQLIQVAGRAGRARDPGEVWLQTHHPGHP
LLETLVSGGYHPFAQAELNQRQAAGFPPFAHLALMRAEAQQVEHANAFLLAARQLLGEQN
VVEAYGPMPAPMPRRAGYQRTQLLLSAAQRPPLHGVLSQLVPQLYALPEARKVRWSLDVD
PTDLY
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaccgattccgaccctgcaggtcgccctgcccgtccccctgccccgcctgttc
gactacctgtcgccggagggcgatggcccggcggtcgcggtcggctgccgcctgaaggtg
ccgttcggcaaccgtgagctggtcggtgtggtggcggggcacggccagaccgacgacggc
cagggactgcgccaggccctggcctggtgcgacccgcagccgctgctgcagggtgagctg
tggcagagcctgcagtggctggcacgctacacccacgcccccctgggcgaggtgctgagc
accgccctgcctggcccgctgcgccatggcgaggccctgccggacacccaccactggggc
tggcagctgaccccggaaggccacgaccagcgcgacaggctgcgcgccggcagccggccg
cggcaactggccgaactgctggccgaggccatcgtggatgaggacgtgctgggcgaacgc
atggaggactggcgcactgccgcgcgcagcctggccaagcgcgggctggccgagcgcgtt
gcgctgagcgtggccccccaacacgcgcagccactgcccggccccacgctcaaccccgaa
caggccgaagcggtggccgcgatcaataccgccgacggcttccagccgttcctgctggat
ggcgtgaccggcagcggcaagaccgaggtctacctgcaggcgatcatccattgcctggca
cagggcaagcaggcgctggtgctggtgccggaaatcggcctgaccccgcagaccctggca
cgcttccgcggccgcctcggcatcgccgtgcatgcgctgcattcggggctgaacgacaac
gagcgcgcgcgcgtctgggcagcggcctcacgcggcgaagcacgtgtcatcgtcggcacc
cgctcggcagtgttcacgccgttgccgcaggccggcctgctgatcgtcgacgaggaacac
gacggcagctacaagcagcaggacggcatccgctaccacgcgcgcgatttcgccctggtc
cgggccaagtcgctgggcattccggttctgctgggcagtgcaacgccctcgctggaaacc
ctgcacaacgcctacgccgggcgctacacgcacctgcgcctgaaacagcgcgccggtgat
gcacggccaccgcgcgtgcgcatcctggatgtacgcaagcgaccgctgcatgacggtttg
tcggccgacgtactggccggcatcggcgagcatctgcagcgcggccagcaggtactggtg
ttcaagaaccgccgcggctatgcgccggtgctgctgtgccacgactgcggctggaccgcg
ccatgccagcgctgcgatgcgccgatgaccgtgcatggtggcggccgtcgcctgcagtgc
caccactgcggtgcgcggcaaccggcgccgttggcgtgcccggcctgcggcagcctggcg
ctgcagccgcagggtatcggcaccgaacgcctggaagaacacctcaccgccgccttcgcc
gactttccggtggtgcgcatcgatcgcggcaccacttcgcgccgcgatgcgctggaacag
cagctggcgaaactgggtgaccagcccggcatcctggtcggcacgcagatcctggccaag
ggccacgacctgcccaagctgacgctggtggtggtggtgggcatcgacgaaggtctgttc
tccgccgacttccgcgccagcgagaaactggcgcagcagctgatccaggtggccggtcgc
gcgggacgtgcacgtgaccccggcgaggtctggctgcagacccatcaccccgggcacccg
ctgctggaaaccctggtgagcgggggctaccacccgttcgcgcaggccgagctgaaccag
cgccaggcggccggattcccgccattcgcgcatctggcgctgatgcgggccgaagcgcag
caggtggagcatgccaacgcgttcctgctggccgcgcggcagttgctgggcgagcagaac
gtggtcgaagcctacgggccgatgccggcgccgatgccgcggcgtgccggctaccagcgc
acgcagctgctgctgtcggccgcgcagcggccgccgctgcatggtgtactttcgcaactg
gttccgcagctgtatgcgctgccggaagcacgcaaggtgcgctggtcgctggatgtggat
ccgacggatctgtattga
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