Stenotrophomonas sp. WZN-1: CCR98_18865
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Entry
CCR98_18865 CDS
T04963
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCR98_18865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sten03400
]
CCR98_18865
Enzymes [BR:
sten01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CCR98_18865
DNA repair and recombination proteins [BR:
sten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CCR98_18865
Prokaryotic type
CCR98_18865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ARZ76144
LinkDB
All DBs
Position
complement(4037628..4038341)
Genome browser
AA seq
237 aa
AA seq
DB search
MMDEVADTPTIQLEPSWKLHVGDYLLQPQMRELSSFLRQRKAGGAAVFPPGPQIFAAFDA
TPFEQVKVVILGQDPYHGRGQAHGLSFSVPPGVPVPPSLLNIYKEIESDLGIPRPDHGCL
IPWAQRGVLLLNAVLTVEEGKAGAHQGRGWEGFTDHVVDVLNREREGLVFMLWGAYAQQK
GKVIDTRRHRVLKSPHPSPLSAHRGFLGCRHFSMANEYLQRRSQVPIDWSLPPRSAL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaagtagccgacaccccgacgatccagctggaaccgagctggaagctgcat
gtcggcgattacctgttgcagccgcagatgcgcgagctgtccagcttcctgcgccagcgc
aaggccggtggcgcggcggtgttcccgcccggcccgcagatcttcgccgcgttcgacgcc
acgccgttcgagcaggtgaaggtggtgatcctcgggcaggacccgtaccacggccgtggc
caggcgcacggcctgagtttctcggtgccgccgggcgtgccggtgccgccgtcgctgctg
aacatctacaaggagatcgagagcgatctcggtatcccgcgtccggaccatggctgcctg
attccatgggcgcagcgtggcgtgctgctgctcaatgcggtgctgacggtggaggagggc
aaggccggtgcgcaccaggggcgcggctgggaaggctttactgaccacgtggtggacgtg
ctcaaccgcgagcgcgaagggctggtgttcatgctctggggcgcctatgcgcagcagaag
ggcaaggtcatcgatacccgccgccaccgcgtgctgaagtcgccgcatccgtcgccgctg
tcggcccaccgtggcttcctcggctgccggcatttctcgatggccaacgagtacctgcag
cgccgcagccaggtcccgatcgactggtcgctgccgccgcgttcggcgctctga
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