Stenotrophomonas sp. WZN-1: CCR98_20000
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Entry
CCR98_20000 CDS
T04963
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sten02044
]
CCR98_20000
02035 Bacterial motility proteins [BR:
sten02035
]
CCR98_20000
Secretion system [BR:
sten02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CCR98_20000
Bacterial motility proteins [BR:
sten02035
]
Pilus system
Pilus assembly proteins
CCR98_20000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
Motif
Other DBs
NCBI-ProteinID:
ARZ76348
LinkDB
All DBs
Position
complement(4279498..4283373)
Genome browser
AA seq
1291 aa
AA seq
DB search
MNPTTANRPGASKPTTTACLHADQTTRPHRTVRRFCCRRPSSVNEVQPMSHVPYCLPSRA
HLLGLCLGTVGALGAPPLRAEIAQAPLTAQIEVPGNLVLVPSVEFPTLISAANLGDYSTS
ASYEGYFDNAKCYRYVYAASEPQRHFEPVGLRQGSCKGKAWDGRYLNWVATQTIDPFRKA
LTGGYRVRDTPQETWLEKADFSVQNRAANFATRRIPAGNAADAALVAASTPASWNAIYAR
VYGLGARMYFAGSRDAAIDAAKVTGASTPYNPNDPAHRLVPDQNGRPGDQSVIYEVSMRV
KVCDAAAGLETNCVAYASSAKPEGLLQRYSGRLRYSIFGYLNNGGPNAFDQGGFEPAPEG
GVLRARQKFIGPLVPDPIKPPSMNAAAEWNAVTGVQIANPNPADATATGGGVKDSGVINY
LNKFGQMKTGRTPKYYDNVSELYYAATRYMRGLGNVAEFSALSSNTTTRYRQADGFPVIS
RWEDPIAYQCQSNTLLGIGDTNTWKDKNLPGATSKVGEDHPKPATVAADTTYDVVKAMTQ
IWRMEGYSAAEASRLATAASFYLPEQYNSAYIAALAYLGNTTDLRPDTASNGLPGRQTMR
TYWVDVVEKGDYKITQNQYVLAAKYGGFNVPDGFNPFDPSAAKLADASWWNGVDLVNGDR
REKRPRTFFAASDATRMVASLENAFQMIAQPRPGAGSALASNGGALDVDGRIFTASYRTG
SWTGDLAAYGVDATSGAPNTGTAQWSAAARLDARDWKRRALYTASGGRLLPLRWSNLPPA
AQNVLGDGSVLDYLSGDRSNEGRQGLRIRESLLGDIVNSSPVYAGAPNPRLYGNRRFQGS
DRYAAFAAAQASRIPTVYVSANDGLLHAFNAANGEEIFAFMPATAIGEPLRAYTREGYTH
QYNVDGELTVADAFIGGAWRTVLVGTLGRGGRGVFALDVTNPSSPSLLWEHDDRTIPGLG
RVLGKPLVAQVADGDWRVMLGNGVEGSTGGSQLVNIGLAGGQVQSISLDDQGKGASGPRP
WDSDRDGFAETAYVGDLGGGVFRVSLHAGRAERLFSARSGSEAQPITAAPLVGRNPDTAE
TWVFVGTGALLEMADLGDTRVQSWYGLRDKGHPINGRLGLVATRITAESPNGGRVVDKQD
APGEDGWVMDLVSPAAGAQGERMIVPSQFRGRVLLGTTRIPDASNPCNPTGSGYYMALDP
FTGGRLDDSFFDMDGNGHVGNPGDLLDENGSPVPSSGYLVEQGPNAPGFLGDWLGGTGED
GGLFGVITNPIGNRVRRVSWREVRLVDDKEE
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaactacggcgaatcgcccgggcgcgtcgaagccgactactaccgcgtgcttg
cacgcggatcagaccaccaggccgcaccggaccgttcgcaggttctgctgcaggcgacca
tcgtccgtgaatgaggttcaaccgatgtcccacgtgccctactgtcttcccagccgcgcc
cacctgctgggactatgcttgggcacggtcggtgcactgggggcgcccccgcttcgtgcc
gagatcgcacaggcaccgctgacggcgcagatcgaagtgccaggcaacctcgtgctggtg
ccgtcggtggaattcccgacgctcatcagcgcagccaacttgggggactattccacgtcg
gccagctacgaaggttacttcgacaacgctaagtgctaccgctatgtgtacgcggccagt
gagccgcaacgtcacttcgagccggtcggcctgcggcagggctcctgcaagggcaaggcc
tgggatgggcgctacctcaactgggtcgcaacccagactatcgaccctttccgcaaggcc
ctgaccggcggttatcgcgtgcgtgatacaccgcaggaaacgtggttggaaaaggccgat
ttctccgtacagaaccgcgccgccaactttgccacgcggcgtataccggcaggcaacgca
gccgatgcggcgctggtggccgcctccacgcctgcatcctggaacgccatctatgcgcgt
gtctacggcctgggagcacgcatgtacttcgctggcagccgggatgccgccatcgacgcg
gccaaggtaaccggcgcaagcacgccctacaacccgaacgaccccgcacaccggctcgtg
ccggaccagaatggccggccgggcgaccagagtgtgatttatgaggtcagcatgcgggta
aaagtctgcgatgccgcagcagggctggagacgaactgcgtcgcttatgcgtccagcgca
aaaccggaaggcctgctgcaacgctacagtggccggctgcgctactcaatcttcggctat
ctaaacaacggtggtcccaacgccttcgaccaagggggcttcgaaccggcgccggaaggc
ggcgtgctgcgtgcgcgacagaaattcatcggccctctggtgccggatcctattaaaccg
ccctcgatgaacgctgcagcggagtggaacgcagttaccggcgttcagattgccaatcct
aaccccgccgatgccacagcaaccggcggcggggtgaaggatagcggtgtcatcaactac
ctcaataagttcggtcaaatgaagactggccgtactcccaagtattacgacaacgtgagt
gagttgtactacgccgccacgcgctacatgcgcgggctgggcaatgtcgccgagttcagt
gcgctttccagcaataccaccacccgttaccggcaggccgatggcttcccggtcatcagc
cgctgggaagaccccatcgcctaccagtgccagagcaacaccctgcttggcattggcgat
accaatacctggaaagacaagaacctgccgggtgcgaccagcaaggttggcgaggaccac
ccaaagccggccacggtggccgcggacaccacctatgacgtagtgaaagccatgacccag
atctggcgtatggaaggctattcggctgcagaggccagcagactggccaccgccgcatca
ttctacctgccggagcaatacaactcggcctatatcgctgcgctggcgtatctgggtaat
accaccgacctgcgcccagacaccgcgtccaacggcctgccaggcaggcagaccatgcgc
acctattgggtggatgtggttgaaaagggcgactataagatcacccaaaatcagtacgtg
ctggcagcaaagtatggtggcttcaacgtgccggacggattcaatcccttcgatccgtcc
gcagctaagctggccgatgccagttggtggaacggtgtcgatcttgtcaacggcgacagg
cgcgagaagcgcccacgtacgttctttgccgcctccgatgccacgcggatggtcgccagc
ttagaaaatgctttccagatgattgctcagcccaggccgggcgcgggctcggcgctggcc
agcaatggcggcgcgctggatgtcgacggccgcatcttcactgcatcctaccgtaccggt
agctggactggcgatctggcggcctatggtgtcgacgctacaagcggtgcaccaaacacg
ggaactgcgcaatggagcgctgcggcgcggctggacgcgcgcgactggaagcggcgcgct
ctgtacaccgcaagcggggggcgactgctgccactgcggtggtccaatctgccacctgcc
gcgcagaacgtactcggtgatggcagtgtgcttgactatctgtcgggtgatcgcagcaac
gagggtcggcaagggctgcgcattcgtgaaagcttgctgggcgatattgtgaattcctca
cccgtgtatgccggcgcgcccaatcctcgtctgtacggcaatcgacgcttccaaggctcg
gaccgctatgcggcgttcgctgccgcgcaggccagccgcatccctaccgtgtatgtgagt
gccaatgatgggttgctgcatgcgttcaatgccgccaacggtgaggagatattcgccttc
atgccggccacggccatcggagagccgctgcgggcgtacacccgcgaaggctacacgcac
cagtacaacgtggacggcgagttgaccgtagccgacgcttttatcggcggtgcgtggcgg
acggtgctggttggtaccttgggtcgaggcggtcggggtgtgttcgcgctggatgtaacc
aacccgagcagccccagtttgctctgggaacatgacgaccgcaccatccccggccttggt
cgtgtgctgggcaagccgctcgtggctcaggtggccgatggcgattggcgggtgatgcta
ggcaatggcgtagaaggcagtacgggcggttcgcagctggtcaacatagggctggcgggc
ggacaggtacagagcatttcgctggacgatcaaggcaagggagcatccggtccgcgccct
tgggatagcgaccgcgatggctttgctgaaacggcctacgtgggagatcttggggggggc
gtattccgggtgagcttgcacgccggtcgcgcggagaggctgttttccgcacgtagcgga
agcgaagcgcagcccatcaccgccgcgccgctagtgggacgcaacccggataccgccgaa
acatgggtgttcgtcggcaccggcgcgcttctggaaatggccgatctgggcgatacccgt
gtgcaatcttggtacggcctgcgcgacaaggggcatcctatcaatgggcgcttaggcttg
gttgccacccgtattaccgcagaaagtcccaatggtggccgcgtggtcgacaaacaggat
gcgccgggtgaagacggttgggtgatggacttggtatcaccagcggccggcgcgcagggc
gagcgcatgatcgtgcccagccagttccgaggtcgagtgctcctgggaactacccgcatt
cccgatgcgagcaatccgtgcaacccaacgggttcgggctactacatggccttggacccc
tttactggcggacgcctggacgacagcttcttcgatatggacggaaacggccacgtcggc
aaccccggcgatctgctggatgagaacggcagcccggtgccctcgtcgggctatctagtt
gagcaagggccaaacgcgcccggcttccttggcgattggctgggcggtacgggggaggat
ggcgggctgttcggtgtgatcaccaacccgatcggcaatcgcgtgcgccgggtcagctgg
cgcgaggtccgcttggtcgacgacaaggaggaatga
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