Stenotrophomonas sp. WZN-1: CCR98_20475
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Entry
CCR98_20475 CDS
T04963
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten03030
DNA replication
sten03430
Mismatch repair
sten03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCR98_20475
03430 Mismatch repair
CCR98_20475
03440 Homologous recombination
CCR98_20475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sten03032
]
CCR98_20475
03400 DNA repair and recombination proteins [BR:
sten03400
]
CCR98_20475
Enzymes [BR:
sten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCR98_20475
DNA replication proteins [BR:
sten03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCR98_20475
DNA repair and recombination proteins [BR:
sten03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCR98_20475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ARZ76438
LinkDB
All DBs
Position
complement(4387604..4388113)
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AA seq
169 aa
AA seq
DB search
MNRIVALDTETTGISHRLGHRVIEIGAVELIDGQLSGRQFHTYLQPQRRVDWGAQRVHGI
SDAMLVGKPLFSSKAAELLDFLRGSEMVAHNATFDVGFLDNELRLAGIPGTLAQHCRITC
SLKLARGRWPGQGNKLDDVLQRLRIPGNRGLHGALKDAHLLAQVIPHLR
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcatcgtcgcactggacaccgaaaccaccggcatctcccaccgcctggggcac
cgggtgatcgagatcggtgccgtcgaactgatcgatggccagctcagcggccgccagttc
cacacctacctgcagccgcagcgcagggtcgactggggcgcgcagcgcgtgcacggcatc
agcgatgcgatgctggtgggcaagccactgttttccagcaaggccgccgaactgctcgac
ttcctgcgcggcagcgagatggtcgcgcataacgccaccttcgacgtgggtttcctggac
aacgagctgcgcctggctggcatccccggcacgctggcccagcactgccgcatcacctgc
agcctgaagctggcgcgcgggcgctggcccggccagggcaacaagctggatgatgtcctg
cagcgcctgcgcatccccggcaaccggggtctgcacggcgcgttgaaggatgcccatctg
ctggcccaggtgattccgcacctgcgttga
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