Stenotrophomonas sp. Pemsol: PEM_00185
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Entry
PEM_00185 CDS
T10809
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K16053
miniconductance mechanosensitive channel
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
steo02000
]
PEM_00185
Transporters [BR:
steo02000
]
Other transporters
Pores ion channels [TC:
1
]
PEM_00185
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
UbiA
Virul_fac_BrkB
Motif
Other DBs
NCBI-ProteinID:
AYA89261
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Position
37107..38378
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AA seq
423 aa
AA seq
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MVDAVVAVQWLERLQNTLEPYPGAYLALMISALLIAAGLANWVTKRILLRGLRRLLQRLP
GAESGRGSHLMRVISRLSNVVPSQVIASGITLIPDLPPSLVNVIIKLCIVWAVLTVSMAF
SHALDAANSLYERKPDARNKPIKGYLQVVKIVVFVAAGLSIVATLLGVKLGPLVTGLGAA
TAVLMLIFQDTILSLVASVQISGDGRVRIGDWIEMPSQNADGDVIDIALHTITVQNFDKT
ITTIPTKKLVTESFKNWRGMQEAGGRRIKRALYLDQHSVGFLDEGDLAFLGEFALLRDYL
REKEQELGQWNGRLREQGVAEVNSRRVTNLGTFRAYVERYLRSHPGIHTDMTLLVRQLQP
TTEGLPLELYCFTRSTAWSEYEAVQSDIFDHLLAILPAFGLRVFQASSDAMLMAGQRQMA
GSE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgcggtggtggcggtacagtggctggaacggctgcagaacacactggaaccc
tatcccggcgcctacctggcgttgatgatctcggcgctgctgatcgccgccggcctggcc
aattgggtgaccaagcgcatcctgctgcgtggcctgcggcgcctgctgcagcgcctgccg
ggcgccgagtccgggcgcggcagccacttgatgcgggtgatttcgcgcctgtccaacgtg
gtgcccagccaggtgatcgcttcgggcatcaccctcatccccgacctgccgcccagcctg
gtcaacgtcatcatcaagctgtgcatcgtgtgggctgtgctgacggtgtcgatggcgttc
tcgcatgcgctggatgcggccaacagcctgtacgagcgcaagcccgatgcgcgcaacaag
ccgatcaagggctacctgcaggtggtcaagatcgtggtgttcgtggccgccggcctgtcc
atcgtcgccaccctgcttggggtgaagctgggcccgctggtgaccggccttggcgccgcc
accgcggtgctgatgttgatcttccaggacaccatcctgtcgctggtggccagcgtgcag
atcagtggcgatggccgcgtgcgcatcggcgactggatcgagatgcccagccagaacgcc
gacggtgacgtcatcgacatcgccctgcacaccatcaccgtgcagaacttcgacaagacc
atcaccaccatcccgaccaagaagctggtgaccgagtcgttcaagaactggcgcggcatg
caggaggccggtggccgccggatcaagcgcgcgctgtacctggaccagcacagcgtcggc
ttcctggacgagggcgacctggccttcctcggcgaattcgcgctgctgcgcgactacctg
cgtgagaaggaacaggagctggggcagtggaacgggcgcctgcgcgagcagggcgtggcc
gaggtcaacagccgccgcgtgaccaacctgggcaccttccgcgcctacgtggagcgctac
ctgcgcagccacccgggcatccataccgacatgaccctgctggtgcggcagctgcagccc
accaccgaaggcctgccgctggagctgtactgcttcacccgcagcaccgcctggagcgag
tacgaggccgtgcagtcggacatcttcgaccacctgctggcgattctgccggcgttcggc
ttgcgggtgttccaggcctccagcgatgccatgttgatggccgggcagcgccagatggcc
ggctcggagtaa
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