Stenotrophomonas sp. Pemsol: PEM_00925
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Entry
PEM_00925 CDS
T10809
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
steo02000
]
PEM_00925
Transporters [BR:
steo02000
]
Other transporters
Pores ion channels [TC:
1
]
PEM_00925
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AYA89398
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Position
194683..197322
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AA seq
879 aa
AA seq
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MPKHTLLVAALAVALAAPLSAAAETSADAVGDANTLAAVRVTGSNIKRTDTEASNPVQVI
GRQQLEQTGKATVADVLRSISANTGNAANETTNNGWASGSAGIGLRGLSQKNTLVLLNGR
RLANYGFPAGGLSDTFVDLNALPLVAVERIEVLKDGASAVYGSDAVAGVVNIITRQNFEG
AEIGGSFGGADQGGLHEQNLKFVGGLGDLDTDGYNILFSLQGYNRERLDQDERNLTRSGI
YTDKPGGRWNGWSAKGARYLVNGVSVPMLDANGNCPAGTTRVASAPIDGLSGDTCGFNQA
PFTTLIPSTKRYQAYANGTFRLNDNVEAFGEVLYSQIKSAAWFGSSPFFTLESGRFALNA
DSGLAEPVSSLLPASNPYNPYGRAIPIEYTFFDLGGTIKTNRSTAYRGVFGLRGTTANWD
WEVAAFGARSSERESVSGGFANRWALANALSTGSYNLLDPAATPQSVRDSINIATLRPAE
SKLQGVDAKISGSLGHTWAGEIGFAAGAEWRREKLDSNNPWQIDAGLQVRPAIAEVHGQR
QVSAAYAEVNVPLASTLELSAAARADHYDDFGDAFSPKIGLRWQPLDFLLVRASASKGFR
APSLSENSNSTSIAYGSVVDPRDPDVPGSRQNPTFFTVGNNELKPERTRSVNFGVVLSPW
ANTNLSVDYYRIQLDNLVGTNNTQTLVNDNVAGAVQRDERGKLQAVYNRYQNLSELKTSG
IDVELRQRIPTAVLGDFTVSSAYTHVRDYRRPTVVGGPLVDYAGSNLGATLPKDKATTTL
DWKYGDFNAAVTWYYTSSYRQEASTAAKAVQQRVGSYSQYDLYLAYTGIDKLTLYAKVQN
LADKTPPYDASFPGIRAPYDFSQYDLRGRYFTLGFDYRF
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacaccctgctcgtggcggccctggccgtcgctctggccgcgcctttgtcc
gccgccgccgaaacctccgccgacgccgttggtgacgccaataccctcgccgccgtgcgt
gtcaccggttccaacatcaagcgcaccgataccgaggcctccaacccggtgcaggtgatc
ggtcgccagcagctggaacagaccggcaaggccaccgtggccgacgtgctgcgttcgatc
tcggccaacaccggcaacgccgccaacgaaaccaccaacaacggctgggcctccggctcg
gccggcatcggcctgcgcggcctgtcgcagaagaacacgctggtgctgctcaacggccgc
cgtctggccaactacggcttcccggccggcggcctgtccgatacgttcgttgatctcaac
gcgctgccgctggtcgcagtcgagcgcatcgaagtgctcaaggacggcgcctcggcggtg
tacggctccgacgccgtggccggcgtggtcaacatcatcacccggcagaacttcgaaggc
gccgagatcggcggcagcttcggcggtgccgaccagggcggcctgcacgagcagaacctg
aagttcgtcggcggcctcggtgatctggacaccgatggctacaacatcctcttcagcctg
cagggttacaaccgcgagcgcctggaccaggacgagcgcaacctgacccgcagtggcatc
tacaccgacaagcccggtggccgctggaacggctggtcggccaagggcgcacgctacctg
gtcaacggcgtgtcggtgccgatgctcgatgccaacggcaactgcccggccggcaccacc
cgcgttgccagcgcgccgatcgatggcctgtccggtgatacctgcggcttcaaccaggca
ccgttcaccacgctgatcccttcgaccaagcgttaccaggcctatgccaacggcaccttc
cgcctgaacgacaatgtcgaagccttcggcgaagtgctgtacagccagatcaagagcgct
gcctggtttggcagcagccccttcttcaccctggagagcggccgcttcgcactgaacgcg
gacagcggcctggccgagccggtgtcgtcgctgctgccggccagcaatccgtacaacccg
tacgggcgtgcgatcccgatcgagtacaccttcttcgacctcggcggcacgatcaagacc
aaccgctccaccgcctatcgcggcgtgttcggcctgcgtggcaccaccgccaactgggat
tgggaagtggccgcattcggtgcgcgcagcagcgagcgcgagagcgtgtccggcggcttc
gccaaccgctgggcgctggccaacgcactgtccacgggcagctacaacctgcttgacccg
gcagccacgccgcagtcggtgcgtgattcgatcaacatcgccacgctgcgtccggccgag
tccaagctgcagggcgtcgacgcgaagatctccggcagtctgggccacacctgggccggc
gagatcgggttcgccgccggtgccgagtggcgccgcgagaagctcgattccaacaacccg
tggcagatcgatgccggcctgcaggtgcgcccggccattgccgaagtgcacggccagcgc
caggtcagtgccgcctacgccgaagtgaacgtgccgctggcctcgaccctggaactgtcc
gccgccgcgcgtgccgatcactatgatgatttcggcgatgcgttctcgccgaagatcggc
ctgcgctggcagccgctggatttcctgctggtgcgtgcctcagcctcgaagggcttccgt
gcaccgtcgctgtcggaaaactccaacagcaccagcatcgcctatggcagcgtggtcgat
ccgcgtgatccggacgtgccgggttcgcggcagaacccgaccttcttcaccgtcggcaac
aacgaactgaagcccgagcgcaccaggagcgtgaacttcggtgtggtgctgtcgccgtgg
gccaacaccaacctgagcgtggactactaccgcatccagctggacaacctggtcggcacc
aacaacactcagaccctggtcaacgacaatgtggctggcgcggtgcagcgcgatgagcgc
ggcaagctgcaggcggtctacaaccgctaccagaacctgagcgagctgaagacctcgggc
atcgacgtcgaactgcgccagcgcatcccgactgcggtgctgggtgacttcaccgtgtcc
tcggcttacacccacgtgcgcgactaccgtcgcccgaccgtggtcggtggcccgctggtc
gactacgccggcagcaacctgggcgcgaccctgcccaaggacaaggccaccaccacgctg
gattggaagtacggagatttcaacgcagccgtgacctggtactacaccagcagctaccgc
caggaagccagcaccgccgccaaggccgtgcagcagcgcgtcggcagctacagccagtac
gacctgtacctggcctacaccggcatcgacaagctgacgctgtatgccaaggtgcagaac
ctggccgacaagacgccgccgtacgacgcctcgttcccgggcatccgcgcgccatacgac
ttcagccagtacgacctgcgcggccgctacttcacgctgggcttcgattaccgcttctga
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