KEGG   Stenotrophomonas sp. Pemsol: PEM_01040
Entry
PEM_01040         CDS       T10809                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
steo  Stenotrophomonas sp. Pemsol
Pathway
steo00521  Streptomycin biosynthesis
steo00523  Polyketide sugar unit biosynthesis
steo00525  Acarbose and validamycin biosynthesis
steo00541  Biosynthesis of various nucleotide sugars
steo01100  Metabolic pathways
steo01110  Biosynthesis of secondary metabolites
steo01250  Biosynthesis of nucleotide sugars
Module
steo_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:steo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    PEM_01040 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    PEM_01040 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    PEM_01040 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    PEM_01040 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    PEM_01040 (rfbB)
Enzymes [BR:steo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     PEM_01040 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD adh_short NAD_binding_4 NAD_binding_10
Other DBs
NCBI-ProteinID: AYA89419
LinkDB
Position
227280..228335
AA seq 351 aa
MPTWLVTGGAGFIGGNFVLEAVARGVKVVNLDALTYAGNLKTLSSLDGNPNHVFVQGDIG
DSALVTRLLAEHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPA
EQGAAFRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK
GQVGETYNVGGNSEKQNIEVVQAICALLDQRRPRADGQPRSSQITYVTDRPGHDRRYAID
ASKLKNDLGWEPAYTFEQGIAFTVDWYLDNQDWVNGVLDGSYRLQRIGTAA
NT seq 1056 nt   +upstreamnt  +downstreamnt
gtgcccacatggcttgtcaccggcggtgccggattcattggcggtaacttcgttctcgag
gccgtcgcacgcggcgtcaaggtcgtcaatctcgacgccctgacctatgccggcaatctg
aagaccctgtccagcctggacggcaacccgaaccacgtgttcgtgcagggtgacatcggc
gacagcgccctggtcacccgcctgctggccgaacaccagcccgacgccgtactgaatttc
gccgctgagagccacgtggaccgttccatcgacggcccgggtgcgttcatccagaccaac
gtggtgggcaccctgggcctgctggaagcggtccgtgactactggaaggcgctgccggcc
gaacagggcgcggccttccgcttcctgcacgtgtccaccgacgaggtgtacggcaccctg
ggcgagaccggcaagttcagtgaaaccacgccgtacgccccgaattccccgtattcggcg
tcgaaggccgcttcggaccacctggtgcgtgcgttccaccacacctacgggctgccggtg
ctgaccaccaactgctccaacaactacggcccgtatcacttcccagagaagctgatcccg
ctggtgatcgccaaggcgctggccggcgagccgctgccggtgtacggcgatggcaagcag
gtgcgtgactggctgttcgtgtccgaccattgcgaagcgatccgcaccgtactggccaag
ggccaggtcggcgagacctacaacgtcggcggcaattcggaaaagcagaacatcgaagtg
gtgcaggccatctgcgcactgctggaccagcgccgcccgcgtgcggatggccagccgcgc
agcagccagatcacctatgtcactgaccgccccggccatgatcgccgctatgcgatcgat
gcgtccaagctgaagaacgatctgggctgggaaccggcctacaccttcgagcagggcatc
gcctttaccgtcgactggtacctggacaaccaggactgggtcaacggcgtgctggacggc
agctaccgtctgcagcgcatcggcactgcggcctga

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