KEGG   Stenotrophomonas sp. Pemsol: PEM_01410
Entry
PEM_01410         CDS       T10809                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
steo  Stenotrophomonas sp. Pemsol
Pathway
steo00740  Riboflavin metabolism
steo01100  Metabolic pathways
steo01110  Biosynthesis of secondary metabolites
steo01240  Biosynthesis of cofactors
steo02024  Quorum sensing
Module
steo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:steo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PEM_01410 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PEM_01410 (ribD)
Enzymes [BR:steo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PEM_01410 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PEM_01410 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AYA89488
LinkDB
Position
319340..320425
AA seq 361 aa
MTPSFSVLDHLHMANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGGPHAEVF
ALREAGSEARGATAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMRDPFPKVDGGGFDL
LRNAGIEVAEGLMAAPARELNKGFLSRVERNRPWLRVKLAASLDGRTAMADGSSKWITGP
AAREDVQHWRARAGAILTGADTVLADDPMLTVRLAGAEVMPPLRVVLDSRLRSLECSRVR
EGGAPTLYLHDAAVSAPDAADAEFASVPSAEGRLDLGAVLALLAERGINEVHTEAGATLA
GALLRAGWVDELLLYQAPTLLGDNGRPLLAGLGIDAMDQQRRLRVVDQRQVGEDIRLLLR
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgacaccatcgttctccgtcctcgaccacctgcacatggccaacgcgctgcgtctggcc
gagcgcgctgcctataccacccggcccaacccgatggtcggctgcgtgatcgcccacggc
gaacgcgtggtcgggcagggctggcaccagcgcgcaggggggccgcacgctgaagtattc
gcactgcgcgaagccggcagcgaggcccgcggtgccaccgcttatgtcaccctggagccc
tgcgcccactacgggcgcacgccgccgtgcgcactggcgctgatcgaagcgggcgtgacg
cgcgtggtggcggcgatgcgcgatcccttcccgaaggttgatggcggtggcttcgatctg
ctgcgcaatgcaggtatcgaggttgccgaaggactgatggcggcgccggcgcgcgagctc
aacaagggcttcctgtcacgcgtggagcgcaaccgcccgtggctgcgggtgaagctggcc
gccagcctcgatggccgcaccgcgatggccgacggcagctccaagtggatcaccgggccg
gctgcgcgcgaggacgtgcagcactggcgcgctcgcgccggtgcgatcctgactggcgcc
gataccgtgctggccgacgacccgatgttgaccgtgcgcctggccggtgccgaagtgatg
ccgccactgcgcgtggtgctcgattcgcgcctgcgttcgctcgaatgcagccgtgtgcgc
gagggcggtgcgccgacgctgtacctgcacgatgcggcggtgagcgcaccggatgcggcc
gacgccgaatttgccagcgtgcccagcgcagaggggcggttggacctgggtgcggtgctg
gcgctgctggccgagcgtggcatcaacgaagtgcataccgaagccggcgcgacgctggcc
ggtgcgctgctgcgcgctggctgggtggacgaactgctgctgtaccaggcgcccacgttg
ctgggcgacaacggacgcccgctgctggccggcctcggcatcgatgccatggaccagcag
cgtcgcctgcgcgtggttgaccagcgccaggtcggcgaggacatccggctgctgttgcgc
ccgtga

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