Stenotrophomonas sp. Pemsol: PEM_02215
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Entry
PEM_02215 CDS
T10809
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
steo02000
]
PEM_02215
Transporters [BR:
steo02000
]
Other transporters
Pores ion channels [TC:
1
]
PEM_02215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AYA89634
LinkDB
All DBs
Position
complement(500173..502911)
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AA seq
912 aa
AA seq
DB search
MRRQAMAWSIQLALMGVAASAAAQAPASSSVQQLDAVQVTGSRIPRAQVEGPAPITVINA
EQIRSSGFTSVPDVLRAMTQNGGETQSQQSSSGADFSPGAQQVDLRGLGPNHTLVLVNGR
RIADFPMPFKGRSNFTDVSNIPLGMIERIEVLTGSASAIYGSDAIAGVVNFILKKKADGT
TIDMRMGTTSEGGGESFDMSLASGFSRGNFNAVYSVELQSQTPLWAYDRDIQDSTRDGPT
EGSRIARRAYLRTDYNDDYLDPGAATCEVLSGQNQGSTYRAYRPKYGYYCGSDSSIGYGT
ILSKRRGANGYASLSYDFDNGQQWFADVQLGYHTMSLMRDVTQWGRMDANGDESGYFNNE
ATGEIEFWQRQFSPEEMGGLRNAMVRSTQKTFSVTTGFKGNLIGNWDYEAALSHSQYQSR
ISWAQIIAAKANDLFLGPQLGVDDDGFPVYNADPSRLYRPLTRAEYDSIAARTTYTPKSR
TETAAFTLTNAALFALPGGDAGFAATVEVGQQAYSLNPDPLATGYYYYSWKDSDGKGSRN
RWATAAELRMPLHDTVNLSVAGRYDQYRYSGHSIGKATWSGGLEWRPIDTLLVRGSYGTA
FRAPDLHYVFAGPGNDETSAEDLYTCRLEEASDCSDYERNLIRSRTGNRQLDPETSTSWS
AGFVWSPAIGLDLSVDWFDIDMRNQVQDMDVRTLLANEANCRLGSADINSPTCVDALARI
TRSNDGRLYGVRVEPINVARESTSGIDAGLRYRLQTGIGDFIFNGTHTWVKKHDFQRYPG
DRTEDQFAVNSGFDIPRTKTSLSVTWEKDAWSATVYGSRLGKLPTSDSYDQVFDWDSGDS
PYVKATYRYNASLQYRVDDHSRLSLSVVNVFNKMPPKDRTYTAYPYYDVSWFDSVGRTIN
LQYTHKFGGSAL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagacaggcgatggcgtggtcgatccagctggcgttgatgggcgtggctgcttcc
gcggcggcccaggcaccggcttcctcttcggtgcaacaactggacgcggtgcaggtcacc
ggctcgcgcattccgcgcgcccaggtggaaggccccgctccgatcacggtgatcaatgcc
gagcagatccgctccagtggcttcaccagcgtgccggacgtgctgcgtgcaatgacccag
aacggcggtgagacgcagagccagcagtcttccagtggcgccgacttctcgccgggcgcc
cagcaggtggacctgcgcggcctgggcccgaaccacacgctggtgctggtcaatggtcgg
cgtattgccgatttcccgatgccgttcaagggccgcagcaacttcaccgatgtctccaac
atcccgctgggcatgatcgagcgcatcgaagtactgaccggcagcgcctcggccatctac
ggctcggacgcgatcgccggcgtggtcaacttcatcctgaagaagaaggccgacggcacc
acgatcgacatgcgcatgggcaccaccagcgaaggcggcggcgagtcgttcgacatgagc
ctggccagcggtttcagccgtggcaacttcaacgccgtgtacagcgtcgagctgcagtcg
cagaccccgctgtgggcctatgaccgtgacatccaggactcgacccgggatggccccacc
gagggttcgcgcatcgcgcgccgtgcctatctgcgcaccgactacaacgatgactacctg
gacccgggcgccgccacctgcgaagtgctgtccggccagaaccagggcagcacctatcgt
gcctaccgcccgaagtacggctactactgcggcagcgacagctcgatcggctacggcacc
atcctcagcaagcgccgcggcgccaacggctacgcgtcgctgagctacgacttcgacaat
ggccagcagtggttcgccgacgtgcagctcggctaccacacgatgtcgctgatgcgcgac
gtcacccagtggggccgcatggatgccaacggtgatgagtcgggctacttcaacaacgaa
gccactggcgagatcgagttctggcagcgccagttctcgcccgaggaaatgggcggcctg
cgcaacgccatggtgcgcagcactcagaagaccttcagcgtgaccaccggcttcaagggc
aacctgattggcaactgggattacgaagcggcgttgagccattcgcagtaccagtcgcgc
atcagctgggcacagatcattgccgccaaggccaatgacctgttcctcggcccgcagctg
ggcgtggatgacgacggtttcccggtctacaacgccgatccgtcacgcctgtaccgtcca
ctgacccgcgccgagtacgactcgatcgccgcgcgtaccacctacactccgaagtcgcgc
acggaaaccgccgccttcaccctgaccaacgcagcactgttcgcactgcccggtggcgat
gccgggtttgccgcgaccgtggaagtgggccagcaggcctattctctgaaccccgatccg
ctggcgaccgggtactactactacagctggaaggattcggacggcaagggttcgcgcaac
cgctgggcgacggctgcggagctgcgcatgccgctgcacgacacggtcaacctgagcgtg
gcgggccgctacgaccagtaccgctattccggacacagcatcggcaaggcgacctggagc
ggcggcctggaatggcgcccgatcgataccctgctggtgcgcggctcctacggcaccgca
ttccgtgcaccggacctgcactatgtgtttgccggaccgggcaacgacgagaccagcgcc
gaggatctgtacacctgccgcctcgaggaggccagcgactgttccgattacgagcgcaac
ctgatccgcagccgcacaggcaaccgccagctcgacccggaaaccagcacctcgtggagc
gccggcttcgtctggtcaccggcgatcggcctggacctgtcggtggactggtttgacatc
gatatgcgcaaccaggtgcaggacatggacgtgcgcacgctcctggccaacgaagcaaac
tgccgcctgggcagcgccgacatcaattcgccgacctgcgtggacgcgctcgcccgcatc
acccgcagcaacgacggacgcctgtatggcgtgcgcgtggagccgatcaacgtcgcccgc
gaatccacctccggcatcgacgccggcctgcgttatcgcctgcagacgggcatcggcgat
ttcatcttcaacggcacgcacacctgggtgaagaagcatgatttccagcgctaccccggc
gaccgcaccgaagaccagttcgcggtcaacagtggcttcgacattccgcgcaccaagacc
agcctgagcgtgacctgggagaaggatgcgtggtcggcaacggtgtacggctcgcgcctg
ggcaagctgccgacctcggacagctacgaccaggtgttcgactgggacagcggcgacagc
ccgtacgtgaaggcgacctatcgctacaacgcctcgctgcagtaccgcgtcgacgaccac
tcgcgcctgtcgctgtcggtggtcaacgtgttcaacaagatgccgccgaaggaccgtacc
tacaccgcttacccgtactacgacgtgtcctggttcgacagcgtcggccgcacgatcaac
ctgcagtacacccacaagttcggtggcagcgcactgtaa
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