Stenotrophomonas sp. Pemsol: PEM_02765
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Entry
PEM_02765 CDS
T10809
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
steo03032
]
PEM_02765
03036 Chromosome and associated proteins [BR:
steo03036
]
PEM_02765
03400 DNA repair and recombination proteins [BR:
steo03400
]
PEM_02765
DNA replication proteins [BR:
steo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PEM_02765
Chromosome and associated proteins [BR:
steo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PEM_02765
DNA repair and recombination proteins [BR:
steo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PEM_02765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF6927
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AYA89728
LinkDB
All DBs
Position
608251..608523
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDAVAEAADLTKAESSRAVDAVVAAITKALKDGDAVTLVGFGTFQVRDRAARTG
RNPKTGDTIKIAASKNPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaccgaattgatcgatgccgttgctgaagctgccgacctgaccaaggcagag
tccagccgcgctgtcgatgccgtcgttgctgccatcaccaaggcgctgaaggacggcgat
gcggtcaccctggttggcttcggtaccttccaggtccgcgaccgtgctgcccgcaccggc
cgcaacccgaagaccggcgacaccatcaagatcgctgcttcgaagaatccgtcgttcaag
gctggcaaggccctgaaggatgctgtaaactaa
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