Stenotrophomonas sp. Pemsol: PEM_04560
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Entry
PEM_04560 CDS
T10809
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
steo02000
]
PEM_04560
Transporters [BR:
steo02000
]
Other transporters
Pores ion channels [TC:
1
]
PEM_04560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AYA90056
LinkDB
All DBs
Position
complement(996987..999194)
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AA seq
735 aa
AA seq
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MPAHTARLKPHSLALALAALLPSVAFAAGQDTAHRDRHLTELSSVQVTASPLQGDAESLA
RPVEVLAGERLDEQKAGTLGDTVAKLPGVQSTFFGPGVGRPIIRGQEGPRVAVLSNGMGN
MDASTVSADHATSIEPFLADQIEVLKGPATLLFGSGAIGGAVNVVDGRIARELPERPLSG
RAELRGNSVNNERSGMFRLDGVSGNVVLHVDGLVRNGDDYRIPGYAVIDSLEDHHDDHDH
DHAGEEGEEPRRGRLDNSSIRTRAGGVGATWLGEGGYFGVSASTYRTNYGIPNGAHVHAD
GDDHGHDHGHDHGDEEEGGDEHDVRIDMVQNRFETKAGIYNPVSFLKNINARVAYTDYEH
VELEAGTPSTRFTNRGIEARLEAVQQQIGGWDGAFGLQFGNSDFGAKGEEAFVPDTGTKN
IGLFVLQEKQFGPFKLELGGRHDQVKLDPTGDYRRRTFGATNLSAAGIWKLNDAVDLRIG
VDSSERAPTNEELYAAGAHIATRSLEIGDGNLKTERGQRVELGIHTHSERLDFSASVYQT
KFKDFIYLADTGVTEGLPVRAWTQQDAVFRGAEAEALVHLFEGGAGDWDLRLFGDYVKAK
LDGSGSRNLDIAVPHGDHNHNYTVELANTGYLPRIAPARVGADLRWSKDGWRASVGAVRY
SRQKDVAQNEEPSDGYTLVDAHLAYRWDRNASNSYEVFLDGSNLTNREVRPHTSLLRDYS
PLPGRGVAFGIRAFF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccacaccgcacggctcaagccgcattccctggccctggccctcgccgccctg
ctgccgtccgtcgcctttgcagccggtcaggacaccgcccatcgtgaccgccacctgacc
gagctgtcctcggtgcaggtcaccgcgtcgccgctgcagggcgatgccgaatcccttgcg
cgcccggtggaggtgctggccggtgagcgcctggacgaacagaaggccggcaccctcggc
gataccgtggccaagctgcccggcgtgcagagcaccttcttcgggcccggcgtcgggcgc
ccgatcatccgcggccaggaaggcccacgcgttgcggtgctgtccaacggcatgggcaac
atggatgcatccaccgtcagtgcggaccatgccaccagcatcgagccgttcctggctgac
cagatcgaagtgctgaaggggccggccacgctgctgttcggcagcggtgccatcggtggt
gcggtcaatgtggtcgacggccgcatcgcgcgcgagctgcccgagcgcccgctcagcggc
cgcgccgagctgcgtggcaattcggtgaacaacgagcgcagcggcatgttccgcctcgat
ggcgtcagcggcaatgtcgtgcttcatgtggacggcctggtgcgcaatggcgacgactac
cgcattcccggctatgcggtgatcgacagcctggaagaccaccacgacgaccacgaccac
gaccacgcgggcgaggaaggcgaagagccgcgtcgcggccgcctcgacaacagctccatc
cgcacccgcgccggcggcgtcggcgccacctggctgggcgaaggcggctacttcggcgtg
tcggccagcacctaccgcaccaactacggcattcccaacggcgcacacgtgcacgccgac
ggcgacgatcacggccatgaccacggccacgaccacggcgatgaagaggaaggcggcgac
gagcatgacgtgcgcatcgacatggtgcagaaccgcttcgagaccaaggccggcatctac
aacccggtctcgttcctgaagaacatcaacgcacgcgtggcctacaccgactacgagcac
gtggagctggaggccggcacgccctccacccgcttcaccaaccgtggcatcgaagcgcgc
ctggaagcggtgcagcagcagatcggtggctgggacggcgccttcggcctgcagttcggc
aacagtgatttcggcgccaagggtgaagaagcgttcgtaccggataccggtacgaagaac
atcggcctgtttgtactgcaggaaaagcagttcggcccgttcaagctggaactgggcggc
cgccacgaccaggtcaagctggacccgaccggtgactaccggcgccgcaccttcggcgcc
accaacctctcggctgccggcatctggaagctcaacgacgcggtcgacctgcgcatcggc
gtggacagctccgagcgtgcaccgaccaacgaagagctgtacgccgccggcgcgcacatt
gctacccgttcgctggagatcggcgacggcaacctgaagaccgagcgcggccagcgcgtg
gagctgggcatccacacccacagcgagcgcctggacttctccgcctcggtctaccagacc
aagttcaaggacttcatctacctggccgacaccggcgttaccgagggcctgccggttcgt
gcgtggacccagcaggacgcggtattccgcggtgccgaggccgaggccctggtgcacctg
ttcgagggcggcgccggtgactgggacctgcgcctgttcggtgactacgtgaaagccaag
ctggatggcagcggcagccgcaacctcgacatcgccgtgccgcacggcgaccacaaccac
aactatacggtggagctggccaacaccggctacctgccgcgcatcgccccggcccgcgtc
ggcgccgacctgcgctggtcgaaggatggctggcgcgcctcggtcggtgcggtgcgttac
agccgccagaaggacgtggcgcagaacgaggagccgagcgatggctacaccctggtcgat
gcgcacctggcctatcgttgggaccgcaacgccagcaacagctacgaggtgttcctggat
ggcagcaacctgaccaaccgcgaagtgcgtccgcatacctcgctgctgcgcgactactcg
ccgctgccgggccgtggcgtcgcattcggtatccgcgcgttcttctga
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