Stenotrophomonas sp. Pemsol: PEM_05180
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Entry
PEM_05180 CDS
T10809
Name
(GenBank) diguanylate cyclase response regulator
Organism
steo Stenotrophomonas sp. Pemsol
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Response_reg
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AYA90175
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All DBs
Position
complement(1138011..1139354)
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AA seq
447 aa
AA seq
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MPVLPQAAVDGDLADLLPQRILLVENSRAFTGMLREAIEQRLELPVVIASTLAEADRLLS
EGGGWFLVLTGLVLADGDRDAVVEFFLKRDLPTVVVSGVYDEDLRKRVLQQQIIDYVLKN
TPGSIDYLVWLVQRLERNRRIAALVVDDSPSARGYAAALLRMYGHEVHEAADGNEGLAAI
EAHPAIRLAVVDQEMPGMQGVEFTRRLRTLRSRDKVAVIGISGNTDASLIPRFLKNGAND
FLRKPFSREEFFCRVSQNVDQLELIGTLQDLATRDFLTGLPNRRFFLEQSQRQLPQLQLH
GQCVAVAMIDIDHFKHINDTHGHEAGDDALRAVAGAVTAHARSHDLIARFGGEEFCLLVP
DMEQDEALLYFEELRQRIAALEVDIGTATLRMTVSIGLCCLRPQRDALHRLISEADRQLY
LAKAGGRNRVSCTTVASPLRPREPALT
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgctgccgcaggccgccgtcgatggcgacctggccgatctgctgccgcagcgg
atcctgctggtcgaaaactcccgtgcgttcaccggcatgctgcgcgaagccatcgagcag
cgcctggaactgccggtggtgatcgcctccaccctggccgaggccgaccggctgctcagc
gaaggcgggggctggttcctggtgctgaccggactggtgctggccgacggcgaccgcgat
gcggtggtcgagttcttcctcaagcgcgacctgccgacggtggtggtcagcggcgtttac
gacgaggacctgcgcaagcgcgtactacagcagcagatcatcgactacgtgctgaagaac
accccgggcagcatcgactacctggtgtggctggtgcagcggctggaacgcaaccgacgc
atcgccgcgctggtggtggacgattcgccgtccgcccgtggctatgccgccgccctgctg
cgcatgtatgggcatgaggtgcacgaagccgccgacggcaacgagggcctggctgcaatc
gaggcgcatccggcgatccgcctggcggtggtcgaccaggaaatgcccggcatgcagggg
gtggaattcacccgtcgcctgcgcaccctgcgctcgcgcgacaaggtggcggtgatcggc
atctccggcaataccgacgcctcattgatcccgcgcttcctgaagaacggcgccaacgat
ttcctgcgcaagccgttctcgcgcgaggagttcttctgccgcgtctcgcagaacgtggac
cagctggagctgatcggcaccctgcaggacctggccacccgcgatttcctcaccggcctg
cccaaccgacgcttcttcctggagcagagccagcgtcagctgccgcagctgcagctgcac
ggccaatgcgtggcggtggcgatgatcgacatcgaccacttcaagcacatcaacgacacc
catggccacgaagcgggcgacgacgcgctgcgcgcggtggccggcgcggtgaccgcgcat
gcacgcagccacgacctgatcgcgcgcttcggcggcgaggagttctgcctgctggtgcca
gacatggaacaggacgaggcgctgctgtacttcgaggagctgcgccagcgcatcgccgca
ctggaggtggacatcggcaccgctaccctgcgcatgacggtcagcatcggcctgtgctgc
ctgcgcccgcagcgcgatgcgctgcaccggctgatctccgaggccgaccgccagctgtac
ctggccaaggccggtggccgcaatcgggtcagctgcaccacggtggccagcccgctgcgt
ccacgcgagcctgcgctgacctga
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