Stenotrophomonas sp. Pemsol: PEM_06310
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Entry
PEM_06310 CDS
T10809
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
steo03400
]
PEM_06310
Enzymes [BR:
steo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PEM_06310
DNA repair and recombination proteins [BR:
steo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PEM_06310
Prokaryotic type
PEM_06310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AYA90376
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Position
1355236..1356651
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AA seq
471 aa
AA seq
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MSVALVWFRRDLRLQDNPALQAALDAGHDVVPVYVHAPHEEGEWVPGAASDAWRHRSLTA
LDADLRARGSSLVLRSGDSLPALQLLIEQTGAEAVYWNRKYEPVTQPRDATIKRTLREQG
VDAQSCNGSLLFEPWDIATQQGQPYKVFTPYWRNVLSHWRLPALQAAPEALAPHAVDSLA
LDDLQLAPTLDWDTGFWEYWQPGEAGALEALSVFEDGALRGYREQRDLPDRVGTSRLSPH
LHFGEIAPWRIAHALERLRSAGTDADIDGYLRQLGWRDFAYHLLHHFPKTPTDNLNPRFD
RFPWAAPTAAQLHDWQRGNTGVPIVDAGLRELWHTGYMHNRVRMIVASYLCKHLRAHWLH
GARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQARYISRWVPE
LAALPVKARFAPWQHPLLLAAHAPDYPRTPMVDLAEGRDAALAAYRQSGAG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtagcgttggtatggttccgtcgtgatctgcggctgcaggacaatccggccctg
caggccgcgctggacgcgggccacgatgtggtgccggtctacgtccacgcgccgcacgag
gagggcgagtgggtgccgggtgctgcctccgatgcgtggcgccaccgttcactgaccgcg
ctggatgcggacctgcgcgcgcgcggctcgtcgctggtgctgcgcagtggtgacagcctg
ccggccctgcagttgctgatcgagcagaccggcgccgaggcggtgtactggaaccgcaag
tacgagccggttacccagcctcgcgacgctaccatcaagcgcacgctgcgcgagcagggc
gtcgacgcgcagagctgcaatggcagcctgttgttcgagccctgggacatcgccacccag
cagggacagccgtacaaggtgttcacgccttactggcgcaacgtgctcagtcattggcgc
ctgccggcactgcaggccgcaccggaggcactggcgccgcacgcggtcgacagcctcgca
cttgatgatctccagcttgcaccgacgctggattgggataccggcttctgggagtactgg
cagccgggtgaagccggtgcgctggaggcgctgtcggtgttcgaggacggcgccttgcgc
ggttaccgcgagcagcgtgacctgccggaccgcgtgggcacctcgcggctgtcgccgcac
ctgcatttcggtgagatcgcaccctggcgcatcgcgcatgcgctggaaagactgcgcagt
gccggcaccgatgccgacatcgacggctatctgcggcaactgggctggcgtgatttcgcc
taccacctgttgcatcactttccgaagacgcccacggacaacctcaatccgcgtttcgac
cgcttcccctgggcggcaccgactgcagcgcaactgcacgactggcagcgcggcaacacc
ggcgtgccgatcgttgatgccggactgcgcgagctgtggcacaccggctacatgcataac
cgggtgcggatgatcgtggccagctacctgtgcaagcacctccgcgcgcactggctgcat
ggcgcgcgctggttctgggacaccctcgtcgatgccgacctggccaacaacacgatgggc
tggcaatgggtggccgggaccggcgccgatgccgcgccgtacttccgggtgttcaacccg
gtcacccaggccgagaagttcgatccgcaggcccgctacatcagccgctgggtgcccgag
ctggcggcactgccggtgaaggcgcggtttgcgccgtggcagcatcccctgctcctggca
gcacacgcgcctgactatccacgcacgccgatggtggacctggctgagggccgcgacgct
gcgctggcggcataccgccagtcgggggcggggtaa
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