Stenotrophomonas sp. Pemsol: PEM_07545
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Entry
PEM_07545 CDS
T10809
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
steo Stenotrophomonas sp. Pemsol
Pathway
steo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PEM_07545 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
steo01007
]
PEM_07545 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
steo03016
]
PEM_07545 (lysS)
Enzymes [BR:
steo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PEM_07545 (lysS)
Amino acid related enzymes [BR:
steo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PEM_07545 (lysS)
Transfer RNA biogenesis [BR:
steo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PEM_07545 (lysS)
Prokaryotic type
Other AARSs
PEM_07545 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AYA90612
LinkDB
All DBs
Position
1626937..1628448
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AA seq
503 aa
AA seq
DB search
MSEATDTPPVDENKLIAERREKLKALRGQGIAYPNDFRREDFAGRLQDEFADAEQWTAEA
LEGNGRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQGAVLGDAYTAFKGWDVGDII
AVEGGLTRTKTGELSVKAESIRLLTKSLRPLPDKWHGLADVEQRYRQRYVDLIVTPESRA
VFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLYLRVAPEL
YLKRLTVGGLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVA
RTVNGSTEVEWDGAKIDLGPAFRRWRMDEAVRHHNPEISVADCTDRDALLRHCERLNIRV
KPSYGWGKLLLEIFEATVEHTLIQPTFITDHPVEVSPLARANDNDPGYTDRFELFVNGKE
LANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPTGGLGIGVDRL
VMLLTGSSSIRDVLLFPYMRPEQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagctaccgataccccccccgtcgacgagaacaagttgatcgccgagcgccgt
gagaaactcaaagcgctgcgtgggcagggcatcgcgtacccgaacgatttccgtcgtgag
gacttcgccggccgcctgcaggacgaattcgccgatgccgaacagtggaccgccgaggcg
ctggaaggcaacggccgccaggtgaagatggccggccgcctgatggccaagcgcatcatg
ggcaaggcgagcttcgcgcagatccaggacgagtccggccgcatccagctgttcctgcag
ggggccgtgctgggcgatgcctacaccgcgttcaagggctgggacgtgggcgacatcatc
gccgtagaaggtggcctgacccgcaccaagaccggcgagctgtcggtcaaggccgagtcg
atccgcctgctgaccaagtcgctgcgtccgttgccggacaagtggcatggcctggccgac
gtcgagcagcgttaccgccagcgttacgtcgacctgatcgtcaccccggagtcgcgcgcg
gtcttcatcaagcgctcgaagatcatccgcgccatgcgtgcgtggctggacaaccgcgac
ttcctggaagtcgagacgccgatgatgcattacatccccggcggcgcggcggccaagccg
ttcaccacccaccacaacgcgctggacctggacctgtacctgcgcgtggcgccggagctg
tacctcaagcgcctgaccgtgggcggcctggagcgcgtgtacgagatcaaccgcaacttc
cgcaacgaaggcgtcagcacccgccacaatccagaattcaccatgatggagctgtacgag
gcctatgccacgtacaacgagatcatggacctgaccgaaggcgtgatccgtgacgtggcc
aggacagtcaacggcagcaccgaggtcgagtgggacggggcgaagatcgacctgggcccg
gcgttccgccgctggcgcatggacgaagccgtgcgccaccacaacccggaaatctcggtt
gccgactgcaccgaccgtgacgcgctgctgcgccattgcgagcgcttgaacatccgcgtc
aagccgtcctacggctggggcaagctgctccttgagatcttcgaggccaccgtcgagcac
accctgatccagccgaccttcatcaccgaccatccggtggaagtctcgccgctggcccgt
gccaacgacaatgatccgggctacaccgaccgcttcgagctgttcgtcaacggcaaggag
ctggccaatggcttctccgagttgaacgacccggaagaccaggcccagcgcttccaggcc
caggtggccgcgaaggaaggtggcgacgatgaggccatgcactacgacgccgactacatc
cgtgcgctggagtacggcatggccccgaccggcggcctcggcatcggcgtcgatcgtctg
gtgatgctgctgaccggcagcagctcgatccgcgatgtgctgctgttcccgtacatgcgt
ccggagcagtaa
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