Stenotrophomonas sp. Pemsol: PEM_07565
Help
Entry
PEM_07565 CDS
T10809
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
steo Stenotrophomonas sp. Pemsol
Pathway
steo00061
Fatty acid biosynthesis
steo00071
Fatty acid degradation
steo01100
Metabolic pathways
steo01212
Fatty acid metabolism
steo02024
Quorum sensing
steo04146
Peroxisome
Module
steo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PEM_07565
00071 Fatty acid degradation
PEM_07565
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PEM_07565
09145 Cellular community - prokaryotes
02024 Quorum sensing
PEM_07565
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
steo01004
]
PEM_07565
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
steo04147
]
PEM_07565
Enzymes [BR:
steo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PEM_07565
Lipid biosynthesis proteins [BR:
steo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PEM_07565
Exosome [BR:
steo04147
]
Exosomal proteins
Exosomal proteins of breast milk
PEM_07565
Exosomal proteins of breast cancer cells
PEM_07565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AYA90616
LinkDB
All DBs
Position
complement(1633074..1634750)
Genome browser
AA seq
558 aa
AA seq
DB search
MSLDRPWLQSYPKGVPAEIDVNEFHSVASVFDASVAKFRDRPAYSSFGKVLTYGETDALV
NQFAAYLLGELKLKKGDRVALMMPNCLQYPVATFGVLRAGLTVVNVNPLYTARELKHQLI
DAGVTALVVVDNFGDTVEQVIADTPVKHVVTTGLGDLLGAKGVIVNFVLKYIKKMVPNYH
LKGAVRFRQALKIGSRHSLPQVEIDHDDIAFLQYTGGTTGVAKGAMLTNRNLIANMQQAS
AWISASGIEMGKEWIITALPLYHIFALTANGLVFMKFGGCNHLITNPRDMKGFVKELKSV
RFTAITGVNTLFNGLLNTPGFDTVDFSSLKVTLGGGMAVQRAVAERWKKVTGVTLVEAYG
LTETSPAACINPLTLTEYNGSIGLPIPSTDACIKDDNSAILPLGEVGELCIKGPQVMKGY
WQRPEETAKTIDADGWLHTGDMAKMDEQGFFYIVDRKKDMILVSGFNVYPNEVEDVIAMM
PGVLEVAAVGVPDDKSGEVVKVVIVKKDPNLTAEMVKEHARANLTGYKHPKIVEFRKELP
KTNVGKILRRELRDTPAQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggatcgtccctggctgcagagctatccgaaaggcgttcccgccgagatcgac
gtcaacgagttccattcggtagcttcggtcttcgacgcttccgtcgcgaaattccgcgac
cgtcccgcctactccagcttcggcaaggtcctcacctatggcgagaccgacgcgctggtc
aatcagttcgcggcctacctgctgggagagctcaagctcaagaagggtgaccgcgtcgcc
ctgatgatgcccaactgcctgcagtacccggtggccaccttcggcgtgctgcgcgccggc
ctgaccgtggtcaatgtcaatccgttgtacaccgcgcgcgagctcaagcaccagctgatc
gatgccggcgtgaccgcactggtggtggtcgacaacttcggcgacaccgtcgagcaggtc
atcgccgatactccggtcaagcacgtggtcaccaccggcctgggcgacctgcttggcgcc
aagggcgtgatcgtcaacttcgtgctgaagtacatcaagaagatggtgcccaactaccat
ctcaagggcgcggtgcgcttccgccaggcgctcaagatcggcagccgccacagcctgccc
caggtcgagatcgaccacgacgacattgcgttcctgcagtacaccggcggcaccaccggc
gtggccaagggcgcgatgctgaccaaccgcaacctgatcgccaacatgcagcaggcctcg
gcctggatcagtgcgtcgggcatcgagatgggcaaggagtggatcatcaccgccctgccg
ctgtaccacatcttcgcactgaccgcgaacgggctggtcttcatgaagttcggtggctgc
aaccacctgatcaccaatccgcgtgacatgaagggcttcgtcaaggaactcaagtcggtg
cgcttcaccgccatcaccggcgtcaacacgctgttcaatggcctgctcaacacccccggc
ttcgacacggtcgacttctcctcgctgaaggtcaccctgggcggcggcatggcggtgcag
cgcgccgtggccgagcgttggaagaaggtcaccggcgtgaccctggtcgaggcgtatggc
ctgaccgagacctcgccggcggcctgcatcaaccccctcaccctgaccgaatacaacggc
tcgatcggcctgccgatcccgtccaccgatgcctgcatcaaggacgacaacagcgccatc
ctgccgctgggcgaggtcggcgagctctgtatcaagggcccgcaggtgatgaagggctac
tggcagcgcccggaggaaaccgccaagaccatcgacgccgatggctggctgcacaccggc
gacatggcgaagatggatgaacagggcttcttctacattgtcgaccgcaagaaggacatg
atcctggtgtccggcttcaacgtgtacccgaatgaagtcgaggacgtgatcgcgatgatg
ccgggcgtgctggaagtggccgcggtcggcgtgccggacgacaagtccggcgaggtggtg
aaggtggtcatcgtgaagaaggatccgaacctgaccgccgaaatggtcaaggagcatgcc
cgggccaacctgaccggctacaagcaccccaaaatcgtcgaattccgaaaggagctgccg
aagaccaatgtcggcaagatcctccgtcgcgaactccgcgatacgcccgcccagtaa
DBGET
integrated database retrieval system
