Stenotrophomonas sp. Pemsol: PEM_07815
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Entry
PEM_07815 CDS
T10809
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
steo Stenotrophomonas sp. Pemsol
Pathway
steo02020
Two-component system
steo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PEM_07815
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PEM_07815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
steo03000
]
PEM_07815
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
steo02035
]
PEM_07815
Transcription factors [BR:
steo03000
]
Prokaryotic type
Helix-turn-helix
Other families
PEM_07815
Bacterial motility proteins [BR:
steo02035
]
Flagellar system
Flagellar assembly proteins
Others
PEM_07815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
FleQ
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
AAA_30
AAA_19
bpMoxR
AAA
MCM
Motif
Other DBs
NCBI-ProteinID:
AYA90663
LinkDB
All DBs
Position
complement(1686731..1688233)
Genome browser
AA seq
500 aa
AA seq
DB search
MSESRILVLDNDAVRAERTVALLEFMDFNPRWVSDAADFDLGRQRQHDWMAVIVGSLDDN
PASTALYNWLGGSSLPPPVLLADGDTAVFAQQHGLHEANIWPLETPLRHAQMEALLRRAS
LKRLDAEHQAGAAQDQGPTGNGPAVSALRTMIEQVAAFDTTVLVLGESGTGKEVVSRAIH
QRSPRRDGPFVAINCGAIPADLLESELFGHEKGAFTGALTARKGRFEMAEGGTLLLDEIG
DMSLPMQVKLLRVLQERSFERVGGNQTIRCNVRVVAATHRDLETRIAEGKFREDLFYRLN
VFPIEVPALRERREDLPALVETIAAQLARTGRGEVRFTPEALQALAGYEWPGNVRELTNL
VERLAVLHPGGSVRVQDLPARYRGDAALAAATPAPAQPAASEERLDLRSFSFHTPGSGSQ
PALEHGIAVNRPAAPAALPDEGMDLRNHMASIELGLINEALERTQGVVAHAAQLLGLRRT
TLVEKLRKYGIEREQAELAG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaatcgcgcatcctggtgctggacaacgacgccgtgcgcgcagagcgcaccgtt
gccctgctggaattcatggacttcaatccgcgctgggtctccgacgcggccgacttcgac
ctgggccggcagcgccagcacgactggatggcggtgatcgtcggcagcctggacgacaac
cccgccagcaccgcgctgtacaactggctgggcggcagcagcctgccgcctccggtgctg
ctggccgatggtgatactgcagtgtttgcccagcagcacgggctgcatgaagcgaatatc
tggccgctggaaacgccgctgcgccacgcgcagatggaagccctgctgcgccgcgccagc
ctcaagcgcctggatgccgagcatcaggccggcgccgcgcaggaccagggacccaccggc
aatggcccggcagtgagcgccctgcgcaccatgatcgaacaggtggccgcattcgatacc
accgtgctggtgctgggtgaatccggtaccggcaaggaagtggtgtcgcgcgccatccac
cagcgttcgccgcgccgtgacggaccgttcgtggcgatcaactgcggcgccattccggcc
gacctgctggaaagcgaactgttcggccatgagaagggcgccttcaccggcgcgctcacc
gcgcgcaagggccgtttcgaaatggccgagggcggcaccctgctgctcgacgaaatcggc
gacatgagcctgccgatgcaggtgaagctgctgcgcgtgctgcaggagcgcagtttcgag
cgcgtgggtggcaaccagaccatccgctgcaacgtgcgcgtggtggccgcgacccatcgc
gacctggagacccgcatcgctgagggcaagttccgcgaggatctgttctaccgcctcaac
gtgttcccgattgaagtacccgcgctgcgcgagcgtcgcgaagacctgccggcactggtg
gaaaccatcgccgcgcagctggcccgcactggccgtggcgaagtgcgcttcaccccggaa
gccctgcaggcgctggccggctacgaatggccgggcaacgtgcgcgagctgaccaacctg
gtcgagcgcctggcggtgctgcatccgggtggctcggtgcgcgtgcaggacctgccggcc
cgttaccgtggcgatgcggcactggccgccgccacgccggcaccggcacagccggccgcc
agcgaagaacgcctggacctgcgcagtttctccttccacaccccgggcagcggcagccag
ccggcactggagcacggcattgccgtcaatcgcccggcggcaccggcagcgctgcccgac
gaaggcatggacctgcgcaaccacatggccagcatcgaacttggcctgatcaacgaagca
ctggaacgcacccagggcgtggtcgcccacgccgcccagctgctcggcctgcgccgcacc
accctggtggaaaagctgcgcaagtacggcatcgaacgcgagcaggccgaactggccggc
tga
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