Stenotrophomonas sp. Pemsol: PEM_08085
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Entry
PEM_08085 CDS
T10809
Name
(GenBank) recombination factor protein RarA
KO
K07478
putative ATPase
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PEM_08085
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Paralog
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
AAA_16
RCF1-5-like_lid
AAA_22
Mg_chelatase
Cdc6_lid
AAA_14
ResIII
DUF815
AAA_30
nSTAND3
Sigma54_activat
DNAX_ATPase_lid
Sigma54_activ_2
AAA_28
CPT
AAA_lid_RFC1
AAA_25
ATPase_2
NPHP3_N
AAA_18
AAA_3
Rad17
nSTAND_NTPase5
AAA_17
AAA_11
ABC_tran
Viral_helicase1
RNA_helicase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AYA90713
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Position
1744411..1745772
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AA seq
453 aa
AA seq
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MARHRSTSFPGPDLLSVDREHLRPLAERMRPRTLDEMVGQKRLLAPDSALRRAVESGRVH
SMILWGPPGCGKTTLSLLLAEYSDAEFRAISAVLSGLPEVRQVLAEAAQRFAEGRRTVLF
VDEVHRFNKAQQDAFLPHIERGTILFVGATTENPSFELNSALLSRCRVHVLEAVSPTDIV
EALERALGDRERGLGEEGIEVAPELLLEIATAADGDVRRALTLLEIAAELAGGEGGRITP
QTLTQVLADRTRRFDKGGEQFYDQISALHKSVRSSNPDAALYWLTRMLDGGCDPSYLARR
LTRMAIEDIGLADPRAQSMALEAWDIYERLGSPEGELAFAQLVLYLASTAKSNAGYAAFN
QAKADVRQSGTEEVPLHLRNAPTRLMKELGYGAEYQYDHDAEGGIALDQTGFPDAMGERV
YYNPVPRGLEIKLKEKLDRLRAEREAARAANGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagacatcgttcaacttccttccccggccccgatctgctgagcgttgatcgggaa
catctgcgcccgctggccgagcgcatgcgcccgcgcaccctcgacgaaatggtcgggcag
aagcgcctgctggcgccggacagcgcgctgcgtcgcgcggtcgaatccgggcgcgtgcat
tcgatgatcctgtggggcccgccgggctgcggcaagaccacgctgtcactgctgctggcc
gagtactccgatgccgagttccgtgccatctctgccgtgctgtccggcttgccggaagtg
cgccaggtgctggccgaggctgcgcaacgattcgccgaaggccggcgcaccgtgctgttc
gtggacgaggtgcatcgcttcaacaaggcgcagcaggatgccttcctgccgcacatcgag
cgtggcacgatcctgttcgtcggtgccaccaccgagaatccgtcgttcgagctgaactcg
gcgctgctgtcgcgttgccgcgtacatgtgctggaagcggtatcgccaaccgatatcgtc
gaggcgctggaacgcgcgctgggcgaccgcgaacgcggcctgggcgaggagggtatcgag
gttgcgcccgagctgctgctggaaatcgccactgccgctgatggtgacgtgcgccgcgca
ctgacccttcttgaaatcgccgccgaactggcgggtggggagggcggtcgcatcaccccg
cagaccctgacccaggtgctggccgatcgtacccgccgcttcgacaagggcggcgagcag
ttctacgaccagatctcagcgctgcacaagtcggtacgcagttccaatccggatgccgcg
ctgtactggctgacccgcatgctcgatggcggttgcgatccatcctacctggcacgtcga
ctgacccgcatggcgatcgaggacatcggcctggccgatccgcgcgcgcagagcatggcg
ctggaagcctgggacatctacgagcggctcggcagcccggaaggcgagctcgcgttcgcc
cagctggtgctgtacctggccagcaccgccaagtcgaacgcgggctatgcggcgttcaac
caggccaaggccgacgtgcgccagagcggtaccgaagaggtgccattgcacctgcgcaat
gcgccaaccaggctgatgaaggagctgggctatggcgccgaataccagtacgaccacgat
gccgaggggggcatcgcgctggaccagaccggtttcccggatgcgatgggcgaacgggtg
tactacaacccggtgccgcggggcctggagatcaagctgaaggaaaagcttgatcggctg
cgcgccgaacgtgaggcggcgagggccgcgaacggccgttga
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