Stenotrophomonas sp. Pemsol: PEM_11475
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Entry
PEM_11475 CDS
T10809
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
steo03009
]
PEM_11475
Enzymes [BR:
steo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PEM_11475
Ribosome biogenesis [BR:
steo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PEM_11475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AYA91331
LinkDB
All DBs
Position
2457081..2458718
Genome browser
AA seq
545 aa
AA seq
DB search
MSDTPRNKLSLKREATSEQFKLEERLHKVLAQAGLGSRRALEQRIAEGLVKVNGEVAQTG
MSVKSGDRIELDGRGFVATALAEPSRVLVYNKPEGQVTTREDPEGRPTVFESLPPLKGAR
WIAIGRLDINTTGLLLATTDGELANAMMHPSFEVEREYVVRVRAPEGEEKVSDAIVDRLS
RGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRTRYGK
VSLPRELARGHSVELGTAQVEALRAQLKLEEGAPSALTLQPVIGQRRAAKTTVRVREGGR
GNAYVNGHNTADEGRELRRFDNVREDRGRGRGGKGGGFKGGLTVSGEAAAKQSQKPFKQR
APKNDRSLPEGNPAAFRTWYVPDGVSTGPSGHRNAGPGARGPGARGPGARGPGAGGQGRP
YGKPKGPGAGGGQGRGGFGGEGRGGAGGQGRPAGAGNRSQGQGNKHPYGHPGNAPSFPSD
HATPGFNPYGSPKPAQGARPGGRGPGGGGNRGPGGSRGPGGPGGHRGPGGNRGPGGPRRS
GPRGG
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgtaacaagctctcgctgaagcgcgaagccacctccgaacagttc
aagctggaagagcgcctgcacaaggtgctggcccaggccggcctcggctcgcgccgcgcg
ctggaacagcgcatcgccgaaggcctggtcaaggtcaacggtgaagtcgcgcagaccggc
atgtcggtcaagagcggcgacaggatcgaactggatggccgcggcttcgtcgccactgcc
ctggccgagccgtcgcgcgtgctggtctacaacaagccggaaggccaggtgaccacccgc
gaagatcccgaaggccgcccgaccgtgttcgagtcgctgccgccgctgaagggcgcgcgc
tggatcgccatcggccgcctggacatcaacaccaccggcctgctgctggccaccaccgac
ggtgagctggccaacgccatgatgcacccgtcgttcgaggtcgagcgcgagtacgtggtg
cgcgtgcgtgcaccggaaggcgaggaaaaggtctccgacgccatcgtcgaccgcctcagc
cgtggcgtcgcactggaagacggtccggccaagttcgatgagatcgaacgcatcggcggc
accgattctcacgactggttccgcgtcgtggtgaaggaaggccgcaaccgcgaagtgcgc
cgcctgtgggaatcgcagggctgccaggtcagccgcctgaagcgcacccgctatggcaag
gtgagcctgccgcgcgaactggcccgtggccattcggtggaactgggcaccgctcaagtg
gaagcgctgcgtgcgcagctgaagctggaagaaggcgctccgtcggcattgacgctgcag
ccggtgatcggccagcgccgcgccgcaaagaccaccgtgcgcgtgcgcgaaggtggccgc
ggcaatgcctacgtcaatggccacaacaccgctgacgaaggtcgcgagctgcgccgtttc
gacaacgtccgcgaagaccgcggccgtggtcgcggcggcaagggtggcggcttcaagggc
ggcctgacggtcagcggtgaagcagcggccaagcagtcgcagaagccgttcaagcagcgc
gcgccgaagaatgaccgttcgctgccggaaggcaatccggccgcgttccgcacctggtac
gtgcccgatggcgtgagcaccggcccgagcggccatcgcaatgccggcccgggcgcacgt
ggcccgggcgcacgtggcccgggtgcccgtggtccgggcgcaggcggccaaggccgtccg
tacggcaagccgaagggcccgggcgccggtggcggccagggccgtggcggtttcggtggt
gaaggccgtggcggcgcaggcggtcagggtcgtccggccggtgccggcaaccgctcgcag
ggccagggcaacaagcacccgtacggtcatccgggcaacgccccgagcttcccgtccgac
catgcaaccccgggtttcaacccgtatggcagcccaaagccggcacagggcgcccgtccg
ggcggtcgtggtccgggtggtggtggcaaccgtggcccgggcggtagccgtggtcccggc
ggtccggggggccaccgtggccccggtggcaaccgcggtcccggcggcccgcgccgtagc
ggcccgcgcggcggctga
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