KEGG   Stenotrophomonas sp. Pemsol: PEM_12305
Entry
PEM_12305         CDS       T10809                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
steo  Stenotrophomonas sp. Pemsol
Pathway
steo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:steo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PEM_12305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:steo03019]
    PEM_12305
   03009 Ribosome biogenesis [BR:steo03009]
    PEM_12305
   03036 Chromosome and associated proteins [BR:steo03036]
    PEM_12305
Enzymes [BR:steo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PEM_12305
Messenger RNA biogenesis [BR:steo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PEM_12305
Ribosome biogenesis [BR:steo03009]
 Eukaryotic type
  90S particles
   RNase
    PEM_12305
 Prokaryotic type
  rRNA processing factors
   PEM_12305
Chromosome and associated proteins [BR:steo03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PEM_12305
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: AYA91485
LinkDB
Position
complement(2641434..2642114)
AA seq 226 aa
MPNKPFQRGDLIGHPFRDPALLKQALTHRSAGAPHNERLEFLGDSIVNMMAAEALYRRWP
KADEGAMTRARAELVREGALAVIGRSLELGERLILGPGEMKSGGHRRDSILADAVEAVVA
AIYLDAGFEACRAVVLPWFSASIEALPASGRPEKDPKTRLQEWLQARQKALPQYELVSES
GDDHAKHFRVRCNVADPAASTEGEGASRRLAEQQAAAAVLEQLDSK
NT seq 681 nt   +upstreamnt  +downstreamnt
gtgccgaataaacctttccaacgtggtgacctgatcggtcatcccttccgcgacccggcg
ctgctgaagcaggcgctgacgcatcgcagtgccggtgcgccacacaacgagcgcctggag
ttcctgggcgacagcatcgtcaacatgatggcggccgaggcgttgtaccgacgctggccc
aaggccgacgagggcgcgatgacccgtgcccgcgccgagctggtgcgtgagggcgcgctg
gcggtgattggacgtagcctggagctgggcgagcggctgatcctgggcccgggcgaaatg
aagtccggtggccaccgtcgtgattcgatcctggccgacgcggtggaagccgtggtggct
gcgatctacctggatgccggtttcgaggcctgccgggcggtggtactgccctggttcagc
gcttcgatcgaggcactgccggcctccggccggcccgagaaggaccccaagacccgcctg
caggaatggctgcaggcccgacagaaggcgttgccgcagtatgaactggtgtcagaatcc
ggtgacgaccacgccaagcacttccgggtacgctgcaacgtagccgacccggccgccagc
accgagggcgaaggcgcctcgcggcggcttgccgaacaacaggcggctgcggccgtccta
gaacaactggattccaagtga

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