Stenotrophomonas sp. Pemsol: PEM_12590
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Entry
PEM_12590 CDS
T10809
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
steo03000
]
PEM_12590
Transcription factors [BR:
steo03000
]
Prokaryotic type
Helix-turn-helix
Other families
PEM_12590
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_5
Mg_chelatase
HTH_8
AAA_16
HTH_23
HTH_Tnp_1_2
Hydrolase
HTH_17
AAA_2
ATPase
HTH_11
AAA_7
ketoacyl-synt
AAA
HTH_Tnp_ISL3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AYA91538
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Position
2710803..2712386
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AA seq
527 aa
AA seq
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MYLPRSPLRHADTDPGRPVIWTVSVSRLTGLLGDVIPEFDRRARIEQINLGFEEAVDVIG
QRLRREHCDVVIAGGSNAAWLRGRLELPLVPIQANGFDLMEALARARRIASRIGLVTHAS
DVPAFSNFQQSFGLDIEHRRFVTREDARDCIADLRANGIEVIVGTGMAIDHAEQAGLPGV
LLYSADSVRQAFEHALELTQALARSSGNRAAPRRRPAARADTHELLGDSQAMAQVRAQIA
LYAPHDSTVLVTGETGTGKELVARQLHAASGRRGRFVALNCGAISESLLEAELFGYSDGA
FTGARRGGRVGLVEAADGGTLFLDEIGELPLPLQTRLLRVLEEREVLRVGATEPTAVDLR
VVAATLQSLEQHAATGGFRRDLYYRLAALRIALPPLRARRSDIPLLAQHFFRQLRGIDAP
LDEDALALLSAAQWPGNVRELRNLVDRLRIHWQPGEGLIDTARLLQLAPELVKESATMLP
LESNGKRPPRAQLETLLREHRNDREGMAQALGVSRTTLWRWLRAEGL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgccccgctcacccctgcgccacgccgacaccgaccccggtcgcccggtgatc
tggacggtcagcgtctcgcgcctgaccggcctgctcggcgatgtcattcccgaattcgat
cgacgcgcgcgcatcgagcagatcaacctaggtttcgaggaagcggtggatgtgatcggt
caacgcctgcgccgcgagcattgcgacgtggtcatcgccggcggctccaacgcggcctgg
ctgcgcggtcggctggagctgccactggtgccgatccaggccaatggcttcgacctgatg
gaagcgttggcccgtgcccgccgcatcgccagccgcatcggcctggtcacccacgccagc
gacgtaccggcgttcagcaacttccagcagagtttcggcctggatatcgagcaccgccgc
ttcgtcacccgcgaggatgcgcgcgactgcatcgccgacctgcgcgccaacggcatcgag
gtcatcgtcggcaccggcatggccatcgaccatgccgagcaggccggcctgccgggggta
ctgctctattcggccgactcggtgcggcaggcgtttgaacatgcgctggagctgacccag
gcgctggcccgctccagcggcaaccgagccgccccgcgccggcgcccggcagcgcgtgcc
gacacgcatgaactgctcggcgacagccaagcgatggcccaggtgcgcgcacagatcgcg
ctctatgcaccgcatgacagcaccgtactggtgaccggcgaaaccggcaccggcaaggaa
ctggtagcgcgtcaactgcacgccgccagcggccgtcgcgggcgcttcgtggcgctgaac
tgcggcgccatcagcgaatcactgctggaagccgaactgtttggctacagcgatggtgcc
ttcactggtgcacggcgcggtggtcgcgtgggcctggtcgaggccgccgatggcggtacg
ttgttcctggatgagatcggcgaactgccgctgccgttgcagacccgcctgctgcgcgtg
ctggaagaacgcgaggtgctgcgtgtcggcgctaccgaaccgaccgcagtcgacctgcgc
gtggtggccgccaccctgcagtcgctggaacagcacgcggcgaccggcggcttccgtcgc
gacctgtattaccggctggccgcactacgcatcgccctgcccccgctgcgtgcgcggcgc
agtgacatcccgctgctggcacagcacttcttccgccagctgcgtggcatcgacgcgcca
ttggatgaggatgcactggcgttgctgagcgcggcccagtggcccgggaacgtgcgcgaa
ctgcgcaatctggtggatcgactacgcatccactggcagcctggggaaggattgatcgat
acagcgcgtctgctgcagctcgcgcccgaactggtgaaagaaagcgccaccatgctgccg
ctggaaagcaacggcaagcgtccgccgcgcgcgcagctggaaacactgctgcgggaacac
cgcaatgaccgtgagggcatggcacaggcgctgggcgtatcacgcactacgctatggcgc
tggctgcgcgcggaggggctgtag
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