Stenotrophomonas sp. Pemsol: PEM_13040
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Entry
PEM_13040 CDS
T10809
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
steo Stenotrophomonas sp. Pemsol
Pathway
steo00550
Peptidoglycan biosynthesis
steo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PEM_13040 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
steo01003
]
PEM_13040 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
steo01011
]
PEM_13040 (mrcB)
Enzymes [BR:
steo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PEM_13040 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PEM_13040 (mrcB)
Glycosyltransferases [BR:
steo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PEM_13040 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
steo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PEM_13040 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AYA91627
LinkDB
All DBs
Position
complement(2815585..2818011)
Genome browser
AA seq
808 aa
AA seq
DB search
MPRRYDSDDIDDFDDDQQDSGPLWRRRLITWSMAAVALGLGFLIPYTLYLNQQVTQRFGE
LRWQIPTRVYARPLVLTPGKAMDASTLKTELAASAYRDDGQGKEPATYAVNGGRFVISSR
GYNDVDGRVAPRRVELSLADGGVASLRDADSRKALKAARLDPARIATLYGQKQEERRLIR
MDEAPDLLVTGLQAVEDKDFNRHHGIDLSGIARAVWVTIRSGGQSRQGASTLTQQLARSG
LLGIGKEQTLTRKFNEVLYALIMEARYDKRTIFEAYLNQVYLGQRGSQAIHGMSSGAEFW
FGRDLQSLETEQIALLIGLVKGPSFYDPRRNPERALDRRNFVLGKLHDATLIDDAEYQRA
LKAPLGVPKTPGLVAANRFPAYVDLVRRQLAHDYPESALQGAGLSVMTGMSPSAQAYAEG
AVTRTIKSLESQRRPELQAGMVLTDVHNGDVLAVIGSREVSEVGFNRAIEAQRPVGSLLK
PFVYLLALAQPDRYSLASWVDDSPVTVQLGRGRNWSPGNADNRSHGTVRLIDALAHSYNQ
ATVRLGMQVGPERVTQLIHVLAGIKAEANPAVILGSTDQSPYAMAQLYQFLASGGEIQPL
HAVRGVLDPQGKLLKRYDKTPAPAQEGDSIAANLISVGLQQVVASGTAQRLNADGLGRLQ
PAGKTGTTNDGRDSWYAGYTGDHLAVIWIGNDQNQQAGLYGATGAMRVWSGIFQRLPSAP
LRVSNKGLDWQPVAPTGLNSTDEGCPGARRFPFVVGYAPAYAPCAPAASPEGQGEAEGEG
GGWRSWFGLDRKPEAPAEPAATTSPPSR
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgacgctacgattccgacgacatcgacgatttcgacgacgaccagcaggacagc
ggtccgctgtggcggcgccggctgatcacctggagcatggctgcggtcgcattgggattg
ggtttcctcattccctatacgctgtacctgaaccagcaggtgacccagcgtttcggcgag
ctgcgctggcagattccgacgcgcgtgtatgcgcgcccgctggtgctcacccccggcaag
gcaatggatgcgtccacgctgaagaccgaactggccgcctccgcctatcgtgatgacggg
cagggcaaggagccggccacctatgcggtgaacggcggtcgctttgtgatctccagtcgt
ggctacaacgacgtcgatggccgggtggcgccgcgccgggtggagctgtcgctggccgat
ggcggcgtagcctcgctgcgcgacgccgacagccgcaaggcactgaaggccgcgcggctg
gatccggcgcgcatcgccacgctgtacggccagaagcaggaagaacgccgcctgatccgc
atggacgaggcgccggacctgctggtgaccggcctgcaggcagtggaagacaaggacttc
aaccgccatcacggcatcgacctgtcaggcatcgcgcgcgcggtgtgggtgacgatccgt
tccggtggccagagccgccagggcgcttcgacgctcacccagcagctggcccgcagcggc
ctgcttggcatcggcaaggaacagacgctcacccgcaagttcaatgaggtgctgtacgcg
ctgatcatggaagcgcgctacgacaagcgcacgattttcgaggcgtatctcaaccaggtg
tacctgggccagcgcggcagccaggcgatccatggcatgtcctccggcgccgaattctgg
ttcgggcgtgacctgcagtcgctggagaccgagcagatcgccctgctgatcggcctggtc
aaggggccgtccttctacgacccgcggcgcaacccggaacgcgcgctggaccgccgcaac
ttcgtgctgggcaagctgcacgacgccacgctgatcgacgatgccgagtaccagcgcgcg
ctgaaggctccgctgggcgtgcccaagacaccgggcctggtggctgccaaccgcttcccc
gcctacgtcgacctggtccgccggcagcttgcgcatgactatccggaatctgcgctgcag
ggcgcgggcctgagcgtgatgaccggcatgtcgccgtccgcgcaggcctatgccgaaggc
gcggtgacccgcaccatcaagtcgctggaaagccagcgtcgccctgagctgcaggccggc
atggtgctgaccgacgtgcacaacggcgacgtgctggcggtgatcggcagccgtgaggtg
tccgaggtcggcttcaatcgtgcgatcgaggcgcagcgcccggtcggttcgctgctcaag
ccgttcgtgtacctgctggccctggcgcagcctgaccgctattcgctggccagctgggtc
gatgattcgccggtgacggtgcagctcggccgcggccgcaactggagccccggcaacgcc
gacaaccgcagccacggcacggtgcgcctgatcgatgcgctggcgcattcgtacaaccaa
gcgacggtgcgcttgggcatgcaggtcggccccgagcgcgtgacccagctgatccatgtg
ctggccggcatcaaggccgaggccaatccggcggtgatcctcggctcgaccgaccagagc
ccgtatgcgatggcgcagctgtaccagttcctcgcgtccggtggtgagatccagccgttg
cacgccgtgcgtggcgtgctcgatccgcagggcaagctgctcaagcgctacgacaagacc
ccggcaccggcacaggaaggcgattcgattgccgccaacctgatcagtgtcggcctgcag
caggtcgtcgccagcggtaccgcgcagcgtctcaatgctgatggcctcggccgtctgcag
ccagccggcaagaccggcaccaccaacgatggccgtgacagctggtatgccggctacacc
ggcgaccacctggcggtgatctggatcggcaacgatcagaaccagcaggccggcctgtat
ggcgccactggcgcgatgcgggtctggtcgggcatcttccagcgcctgccgagtgcgcca
ttgcgggtcagcaacaagggcctggattggcagccggtggctcccaccggtctcaacagc
accgatgaaggctgccccggcgcgcgccgtttcccgttcgtggtgggctatgcgcctgcc
tatgcgccgtgcgcgccggccgcgtcgcccgaggggcagggcgaggctgaaggcgagggc
ggtggctggcgcagctggttcggcctggaccgcaagccggaagcacccgccgaacctgcc
gccaccacttctcccccgagccgatga
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