Stenotrophomonas sp. Pemsol: PEM_14680
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Entry
PEM_14680 CDS
T10809
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
steo Stenotrophomonas sp. Pemsol
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
AYA91932
LinkDB
All DBs
Position
complement(3198148..3201174)
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AA seq
1008 aa
AA seq
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MTRAVPRAFRPRRLTVSVLQALAVPSVMLLSASVAWAGCSSADPVAGQTVTCDANAPNPQ
TVPVAATGAAGITVNVASTAQLQQSGGGSAISLVGAGGHLLSNLGTISSVGGVAVQLGGG
SRVENAGSISTGNNTALQFVGAGDSVLVNSGTISGRTGVQFGAGDDRLEMQAGSISGGVQ
QGDGNDVLLLSDGTIDSVDQGNGDDQMTVTGGTVTGLVAQGSGRDDFVMSGGTVGALQQG
DNIDTFRMSGGRIIGAFEDGDQAWMTGGRIGRVNMKLDKNLWDQSGGTVDGNVVTGFDTD
TIIISGTAYIGGNISVSGGNDSVTITDGTVRGQVLLSTGDDTFNWNGGGIVYGAIDMGPD
NDVANLSNLNQGNLGAVPLFDGGSGIDQLNLSNVKTTGVGRFQNWETISLTNSTELSFDG
DLVLGDSATGTGTLTVDDTSTVYAGSGGHAIRPFNSGALVEMVNAGRIDLTGTGAGDVFT
VRGNYRGDGGGLYLRTVLGSDNSTSDRLVIDGGTATGTTGIGVLNAGGSGAATLADGILV
VQALNGARTAPGAFSLFAPVAAGAYEYFLFKGGVSAGTAENWYLRSTLVTGPTPAPNGGG
SATPPPLTPPVAPPPPITPAPPPPPEGATDPDLTAGETAPPPPPPEPAPVAPPSDPAVPD
VPVAGGALPGTGAPPTPGARPAEGAVVPLYRVETATYAVVPPLLRETSLASLGTFHERQG
EQRLLYNQGAFRTAWGRLVGQSSEIHWKGDAQPGFDGDVMGLQAGLDVWAAASDNHRNQI
GVFVGRTRAQGKTTGLALGWENVQVGQNRLDDKHVGLYWTFTDSSGGYIDAVAMQSRYDG
RVRSSRGLGFGLSGDGTSVSVEAGKPLLRFGQSAWWLEPQVQVIWQRTSLDDRRDEVSSV
RFDNDNAWTGRIGLRLAGDYQLADNGWQPYFKLNYWHGRSGEDRIRFDDDTIINSQRSRA
LEAGVGVVGRFNRTISAYAVADYTRELGGDRNEKRRIIEGNIGLRADW
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtgccgttccgcgcgctttccgtccgcgccgcctcaccgtttccgtgctgcag
gccctggctgtcccgtccgtcatgctgctgagtgccagcgtcgcctgggccggctgtagc
agcgccgaccccgtcgccggccagacggtcacctgcgatgccaatgcgccgaatccgcag
accgttcccgtcgctgccactggcgcggccggtatcaccgtcaatgtcgccagcacggca
caactgcaacagagcggtggtggcagtgcgatttcgctggtcggggctggcgggcacctg
ctgtccaacctcggcacgatcagttcggtgggtggcgtggcggtccagcttggtggtggc
agccgcgtcgaaaacgccggcagcatcagcaccggcaacaacacggccctgcagttcgtt
ggcgccggcgacagcgtgctggtcaacagcggtacgatcagcgggcgcacgggtgtgcag
ttcggtgcgggcgacgaccgcctggagatgcaggcaggcagcatctccggtggcgtccag
cagggcgatggcaatgatgtgttgctgttgagcgatggcacgatcgacagcgtcgaccag
ggcaacggcgatgaccagatgaccgtcaccggcggcaccgtcaccggcctggtagcgcag
ggcagtggccgcgatgatttcgtcatgagtggcggcacggtcggcgcgctgcagcagggc
gacaacatcgataccttccgcatgagcggtggccgcatcatcggcgcgttcgaggatggc
gaccaggcgtggatgaccggtggccgcatcggccgcgtcaacatgaagctggacaagaac
ctgtgggaccagtccggcggcaccgtggatggcaatgtggtgaccggtttcgacaccgat
accatcatcatctcgggtaccgcctacatcggcggcaacataagcgtcagcggcggcaac
gacagcgtgaccattaccgacggcaccgtgcgcgggcaggtactgctcagtaccggcgat
gacaccttcaactggaatggcggcggcatcgtctacggcgcgatcgacatgggcccggac
aacgacgtggccaacctcagcaacctcaaccagggcaacctcggtgcggtgccgctgttc
gacggcggcagtggcatcgaccagctcaacctcagcaacgtcaagaccacgggcgtgggc
cgcttccagaactgggagacgatcagcctgaccaacagcaccgagctgagcttcgatggc
gacctggtgctgggcgacagcgcaaccggcaccggcacgctcaccgtggatgacaccagt
accgtgtatgcgggcagtggcggccatgccatccgtccgttcaacagtggcgcactggtg
gagatggtcaatgccgggcgcatcgacctgaccggtaccggcgcgggcgacgtgttcacc
gtgcgtggcaactaccgcggagacggtggtggcctgtacctgcgtaccgtgctgggctcg
gacaactccaccagcgaccgtctggtgatcgacggcggtactgccaccgggaccaccggc
atcggcgtgctcaatgccggcggcagcggcgccgccacgctggccgatggcatcctggtg
gtgcaggccttgaatggcgcccgcactgcgccgggcgcgttctcgctgttcgcaccggtt
gcggccggtgcctacgagtacttcctgttcaagggcggtgtcagtgccggtaccgccgag
aactggtacctgcgttcgacgctggtgaccgggccgacgccggcacccaacggtggcggc
agcgcgacaccgccaccgctgacgcctccagtggcaccaccgccgccgatcaccccggca
ccgccgccgccgcccgaaggcgccaccgatccggatctgaccgcgggcgagaccgcgccg
ccaccgccgccaccggaaccggcgccggtggcgccgcccagcgatccggccgtgccggac
gtgccggtggccggcggtgcgctgcccggaaccggtgccccgccgacgccgggtgcacgc
cccgccgagggcgcagtggtgccgctgtaccgcgtggagactgccacctatgccgtggtg
ccgccgctgctgcgcgagacctcgctggccagcctgggtaccttccacgagcgccagggc
gagcagcgcctgctgtacaaccagggcgcattccgcaccgcctggggccggttggtgggg
cagagcagcgagatccactggaagggggatgcgcagcccggcttcgatggcgatgtgatg
ggcctgcaggccggcctcgacgtgtgggctgcggcgtctgacaaccaccgcaaccagatc
ggcgtattcgttggccgcacccgcgcgcagggcaagaccaccggcctggcactgggctgg
gagaacgtgcaggtgggccagaaccgcctggacgacaagcacgtgggcttgtactggacc
ttcaccgacagcagcggtggctacatcgacgccgtggcgatgcagagccgttacgacggc
cgcgtgcgttcctcgcgcgggcttggcttcggcttgagcggtgatggcaccagcgtgtcg
gtggaggccggcaagccgctgctgcggtttgggcagtcggcgtggtggttggagccacag
gtacaggtgatctggcagcgcacctcgctggacgaccgccgcgatgaggtatcgagcgtg
cgcttcgacaacgacaacgcctggaccggccgcatcggcctgcgtctggccggcgactac
cagctggccgacaacggctggcagccgtatttcaagctgaattactggcatggtcgttcc
ggcgaggaccgcatccgcttcgacgacgacacgatcatcaattcgcagcgctcacgcgcg
ctcgaagccggtgtcggcgtggtagggcgcttcaaccgcaccatcagcgcgtacgcggtg
gccgactacacgcgcgagctgggcggtgaccgcaatgagaagcgccgcatcatcgaaggc
aacatcggcctgcgcgcggactggtag
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