Stenotrophomonas sp. Pemsol: PEM_15065
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Entry
PEM_15065 CDS
T10809
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
PEM_15065
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Ortholog
Paralog
GFIT
Motif
Pfam:
YknX_C
BSH_CzcB
CzcB_C
BSH_RND
BSH_CusB
RND-MFP_C
Beta-barrel_RND_2
BSH_YknX
Acyl-CoA_dh_1
Biotin_lipoyl
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AYA92005
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Position
3287953..3289230
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AA seq
425 aa
AA seq
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MIRDTSAQDQIVSSAPAGTTRASWHRYRWPALGAIALLAGIGWAVHAWSNASRSFDSSRV
RIAEVKRGDLVRDIAADGRVIAANSPILYAISAGTVDLKVVAGDVVKKGQELAIIDSPEL
RSKLAQEQATLAGLEAEASRAALDATLARAKSRKETDQATIERQAADRDLQRYQRGYDGG
AVPQIDLAKAKDSLKKADITLANATTDARLQSQGADLDARNKRLLADRQKAVVAEVQRQV
DALTLRAPFDGQVGQVQAVQSTNLAANAPVLGVVDLSKFEVEIKVPESFARDLAIGMPAQ
LTGGNGQPFPGEISAVSPEVVNGEVNARVRFASAQPEGLRQSQRMSVRVLLDTRKNVLKV
ERGPFVEQGNGMAYVMDGRTAVRRPVELGVSSLGEVEIKSGVQPGDRIVVSGSDLFKDAE
RVSVN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgacacttccgcacaggaccagatcgtttcctccgccccggccggcaccacc
cgcgccagctggcatcgctaccgctggccggcgctgggcgccattgcgctgctcgccggc
atcggctgggcggtccatgcctggtccaatgccagccgctccttcgacagcagccgcgtg
cgcatcgccgaggtgaagcggggcgacctggtccgtgacatcgccgccgacggccgcgtg
atcgccgccaacagcccgatcctgtacgcgatctcggccggtaccgtggacctgaaggtc
gtcgccggtgacgtggtcaagaagggccaggagctggcgatcatcgacagcccggaactg
cgcagcaagctggcccaggaacaggcaacgctggccggcctggaagccgaggccagccgc
gccgcgctggacgcgaccctggcccgtgccaagtcacgcaaggaaaccgaccaggccacc
atcgaacgccaggccgccgaccgcgacctgcagcgctaccagcgcggctacgacggcggt
gcggtgccgcagatcgacctggccaaggcgaaggactcactgaagaaggccgacatcacc
ctggccaacgccaccaccgacgcgcgcctgcagagccagggcgccgacctggatgcccgc
aacaagcgcctgctggccgaccgccagaaggccgtggtggccgaagtgcaacgccaggtc
gatgcactgaccctgcgcgccccgttcgatggccaggtcggccaggtccaggcggtgcag
tccaccaacctggccgccaacgcgccggtgctgggcgtggtcgacctgtccaagttcgag
gtcgagatcaaggtgccggagagcttcgcccgcgacctggcgatcggcatgccggcccag
ctgaccggcggcaacggccagccgttcccgggcgagatcagcgcggtatcaccggaagtc
gtcaacggcgaggtcaacgcccgcgttcgcttcgccagcgcgcagccggaaggcctgcgc
cagagccagcggatgtcggtgcgcgtgctgctcgatacccgcaagaacgtgctgaaggtc
gagcgcggcccgttcgtcgaacagggcaacggcatggcctacgtgatggatggccgcacc
gccgtgcgccgcccggtggaactgggcgtcagcagcctgggcgaagtggaaatcaagtcg
ggtgtgcagccgggcgaccgcatcgtggtctccggcagcgacctgttcaaggacgccgaa
cgcgtctccgtcaactga
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