Stenotrophomonas sp. Pemsol: PEM_15790
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Entry
PEM_15790 CDS
T10809
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
steo03021
]
PEM_15790 (rpoH)
Transcription machinery [BR:
steo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PEM_15790 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
KORA
HTH_10
HTH_11
UCR_14kD
GntR
Motif
Other DBs
NCBI-ProteinID:
AYA92141
LinkDB
All DBs
Position
complement(3437256..3438131)
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AA seq
291 aa
AA seq
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MSQNTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDDEQDLARRFRDGNDLDAAREL
VHSHLRFVVHVARGYNGYGLALGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAEM
HEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAAEVSAVAKDLNVSEREVMEMES
RLSGRDIGFDAPTDEDNEHAPPSPAAFLVADDEDPSMAYEREDSEDNQMQLLREGLAELD
ARSRDIIRRRWLDADSKVTLQELADEYGVSAERIRQVEANALKKMKALFTA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacacctctactgcccttgtggcaaacaatctcccgattcccagtgcgctc
ggttcgctggacgcctacatcggtgccgtgcaccagatcccggtgctgtcggtcgatgac
gaacaggacctggcccgtcgcttccgcgacggcaacgatctggacgccgcccgcgagctg
gtgcattcgcacctgcgcttcgtggtgcacgtggcccgcggctacaacggctacggcctc
gcgctgggcgacctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcgcttc
gacccggacatgggcgtgcgcctggtctccttcgccgtgcactggatccgtgccgaaatg
cacgagttcatcctgaagaactggcgcatcgtgaaggtcgccaccaccaaggcgcagcgc
aagctgttcttcaacctgcgcaagtcgaagacgcgcctgggctggatgaacgcggctgaa
gtcagcgcggtggccaaggacctgaacgtgtccgagcgcgaggtcatggaaatggagtcg
cgcctgtccggtcgcgatatcggtttcgatgcgccgaccgacgaggacaacgagcacgcc
ccgccgtcgccggctgcgttcctggttgccgatgacgaagacccgtcgatggcctacgag
cgcgaggacagcgaagacaaccagatgcagctgctgcgcgaaggcctggccgaactggat
gcgcgttcgcgcgacatcatccgtcgtcgctggctggatgccgacagcaaggtgacgctg
caggagctggccgacgagtacggcgtgtcggccgagcgcatccgccaggtcgaggcgaac
gcgctgaagaagatgaaggcgctgttcaccgcataa
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