Stenotrophomonas sp. Pemsol: PEM_16170
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Entry
PEM_16170 CDS
T10809
Name
(GenBank) DNA mismatch repair endonuclease MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
steo Stenotrophomonas sp. Pemsol
Pathway
steo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PEM_16170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
steo03400
]
PEM_16170
DNA repair and recombination proteins [BR:
steo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
PEM_16170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AYA92210
LinkDB
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Position
complement(3522448..3524349)
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AA seq
633 aa
AA seq
DB search
MTSATHPRPIRPLPEILINQIAAGEVVERPASVVKELVENAIDAGASRVDIDLEEGGVRL
IRIRDNGSGIAPEQLPLAVSRHATSKIADLDDLESVATLGFRGEALPSIASVSRFTLCSR
RAHDEHGSALQIEGGKIGEVTPRAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEEW
LRSLALARPDVELRVSHNGKASRRYKPGDLYSDARLAETLGEDFANQAVRVDHSGAGLRL
HGWIAQPHYSRASADQQYLYVNGRSVRDRSVAHAVKMAYGDVLYHGRQPAYVLFLELDPT
RVDVNVHPAKHEVRFRDSRLVHDFVYRTLKDALADTRAGMSAQEIGAGPAHPVDAAAVPT
ASSAGASGFGLVRGAAPGSGGGGGGFSGWRPQQPLGLQVADAPAAYAALYAAPAGVERAA
ALPPMPSENGLPVTSADAGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERL
KNAHDGIGLQSQPLLVPITLAVGEREADTAESEAETLAALGFEVTRAGPGSLHVRSIPAL
LAHAEPEGLLRDVLTDLREHGQSRRVASARDELLSTMACHGAVRANRRLTVPEMNALLRD
MEITERSGQCNHGRPTWARFSLAEIDRWFLRGR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgctacccatccgcgcccgatccggccgttgccggagatcctgatcaaccag
attgccgcgggcgaagtggtcgaacgacccgcgtcggtggtcaaggagctggtcgagaac
gcgatcgacgccggcgccagccgcgttgatatcgatcttgaagagggcggcgtgcgcctg
atccgcatccgcgacaacggcagtggcatcgcgcccgagcagttgcccctggcggtgtcg
cgccatgccaccagcaagatcgccgatcttgacgatctcgaatcggtggccacgctcggt
ttccgtggagaagcgctgccgtcgatcgcatcggtcagccgcttcaccctgtgctcgcgg
cgcgcgcacgacgagcacggttcggcactgcagatcgaaggcggcaagatcggcgaggtg
accccgcgcgcgcatgcgccgggcaccacggtggaagtgcgcgagttgttctacaacgtg
ccggcgcggcgcaagttcctgcgcgccgagcgtaccgaactgggccatatcgaagagtgg
ctgcgttcgctggcgctggcacggccggatgtcgagctgcgcgtgtcgcacaacggcaag
gcctcgcggcgctacaagccgggcgatctgtattccgatgcgcgccttgccgaaacgctg
ggcgaggatttcgccaaccaggccgtgcgcgtggaccacagcggcgccggcctgcgcctg
catggctggattgcgcagccgcattattcgcgcgcgagcgccgaccagcagtacctgtac
gtcaacggtcgctcagtgcgtgaccgcagcgtcgcccacgcagtgaagatggcctacggc
gacgtgctgtatcacggccgccagccggcctatgtgctgttcctcgaactggatccgacc
cgcgtcgacgtcaacgtgcatccggccaagcacgaggtgcgcttccgcgattcgcggctg
gtccacgatttcgtctatcgcacgttgaaggatgcgctggccgatacccgtgccggcatg
tcggcgcaggagatcggtgccggccccgcacatccggtggacgccgccgccgtcccgacg
gcatcgagcgccggcgcgtcggggttcgggctggtgcgcggggctgcgcccggctcggga
ggtggtggtggcgggttttcaggctggcgtccgcagcaaccgctgggcctgcaggtggcc
gatgcaccggccgcctacgccgcgctgtacgccgcgcccgccggcgtcgaacgcgcagcg
gcgttgccgccgatgccgagcgagaacgggttgccggtgaccagtgccgacgcgggtgta
ccgccactgggctacgcgatcgcgcagctgcatggcatctacatcctggccgagaacgct
gaaggcctgatcgtggtcgacatgcatgcggcccacgaacgcatcggctacgagcgcctg
aagaatgcgcacgatggcatcggcctgcagtcgcagccgttgctggtgccgatcacgctg
gcggtgggcgagcgcgaggccgacactgcagaaagcgaagccgagacactggcggcgctc
ggcttcgaggtgacccgggccggccccggttcgctgcacgtgcgcagcattccggcactg
ctggcgcatgcagaaccggaaggactgctgcgcgacgtgctgaccgacctgcgcgagcat
ggccagagccgccgcgtggccagtgcacgcgacgaactgctgtcgaccatggcctgccac
ggcgcggtgcgtgccaaccggcgcctgaccgtgccggaaatgaacgcgctgctgcgcgac
atggaaatcaccgaacggtccggccagtgcaaccacggccgaccgacctgggcccgtttt
tcgctggcggagatcgaccgctggttcctgcgcggacgttga
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