Stenotrophomonas sp. Pemsol: PEM_17055
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Entry
PEM_17055 CDS
T10809
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
steo02000
]
PEM_17055
Transporters [BR:
steo02000
]
Other transporters
Pores ion channels [TC:
1
]
PEM_17055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
T6SS_Tse3_N
Motif
Other DBs
NCBI-ProteinID:
AYA92367
LinkDB
All DBs
Position
complement(3683149..3685467)
Genome browser
AA seq
772 aa
AA seq
DB search
MNTPPTTRLALAIIAAITAPAHAAETHATALDTPTTLNALQVIATPRGAAVAPTQVVGPN
RYIIKAEDLDAMVTGNNGLAMLRQVPGASYTATDGLGLDISATSLFVRGFRMNEMGITFE
GVPLNDNGFLSLTGTSVVNVGVPDGIGAITVSPGGAPVSVFSSSVNGGSLEYRLRDLQDT
PSLRLKQGVGSNSTLVTTVSGQSGQLGEQGPKVLVDLQRVSADKYQGEGTQNFLRGDLKL
QQDVAWGDVTVFLSDSKAKVWGYNNISFDMIRKLGWKADIFYPDYAWAWYVASPENADKS
CGAYTCGELSELIPYDTGQITRDRVSSINHRFQITPVLSGNVQLYNANSHTQATLTDPTV
PSPNGAPFSEQVQTPRLNRLGGMVNLQFETGAHTFTAGFWQEKSKAAAKTEWYQQPLLGE
GPPLKATGPFDVYGPAFKTDNASSWVTRSRQFYLQDDIVLNDTLKLGVGFKAVDFRTRGG
GLGDAKDRPVNGTLRAKSNFLPHVSLFWSPTESTDAFIDLANTMNGYRVAQRGNIGYTAS
AWTITDQEEFDRVAGTLRPEKNWNLTVGASHRFDRLTITGDVFYNDIRNRLLSAAIGTQF
AQINTVRLMPKMHVIGADLGITADLTDHLQFYQGVAVARSYYDSDFVVGDTVYPIKGNAQ
PGYPQISLVSDLSAHFGDWRFGATSTSYLRQPFTYENDIRVPTFWQVNTYAAYRFGADSA
VPGLELRLDVSNLFNRHNIGTATIAGSSFSGDYQTLQRSAPRQLMFSTSMAF
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccccacccacgacgcgcctcgccctggccatcatcgccgccatcaccgcgcca
gcgcatgccgcagaaacgcacgccaccgcgctcgacacgcccaccacgctcaatgccctg
caggttatcgccacaccgcgcggtgcggccgtggcaccgacccaggtggtcggccccaac
cgctacatcatcaaggccgaagacctggacgcgatggtcaccggcaacaacggcctggcg
atgctgaggcaggtaccgggcgccagctacaccgccaccgacgggctgggcctggatatc
tcggccaccagcctgttcgtgcgcggcttccgcatgaatgaaatgggcatcaccttcgag
ggcgtgccgctgaacgacaacggcttcctctcgcttaccggcaccagcgtggtgaacgtg
ggcgtgcccgatggcatcggcgcgatcacggtcagccccggtggcgcaccggtcagcgtg
ttctccagcagcgtcaacggcggcagcctggagtaccgcctgcgtgacctgcaggacacg
cccagcctgcgtttgaagcagggcgtgggcagcaacagcacgttggtcaccaccgtatcc
gggcagagcggccagctcggcgagcagggcccgaaagtactggtcgacctgcagcgcgtg
tctgccgacaagtaccagggcgagggcacgcagaacttcctgcgcggcgacctgaagctg
cagcaggacgtcgcctggggcgatgtcaccgtgttcctgtccgacagcaaggccaaggtc
tggggctacaacaacatctccttcgacatgatccgcaaactgggctggaaggccgacatc
ttctatcccgattatgcgtgggcgtggtacgtggcctcgccggagaatgcagacaagtcc
tgcggcgcctacacttgcggcgagctttccgaactgattccgtacgacaccggccagatc
acccgcgaccgcgtgtcatcgatcaaccatcgcttccagatcaccccggtgctgagtggc
aacgtgcagctgtacaacgccaacagccacacccaggctacgctgaccgacccgaccgta
ccgtcacccaacggcgcaccgttctccgaacaggtgcagacaccacgcctcaaccggctg
ggtggcatggtcaacctgcagttcgagaccggcgcgcacaccttcaccgccggcttctgg
caggagaagagcaaggccgccgccaagaccgagtggtaccagcagccactgctgggcgag
ggcccgccattgaaggccaccggcccgttcgatgtgtacggccccgcgttcaagaccgac
aacgcatcgagctgggtgacccgctcgcgccagttctacctgcaggacgacatcgtgctg
aacgacacgctgaagctgggtgtcggcttcaaggccgtggacttccgcacccgcggcggc
ggcctcggcgatgccaaggaccggccggtgaacggcacgctgcgcgcgaagagcaacttc
ctgccgcatgtctcgctgttctggagcccgaccgaatccaccgatgccttcatcgacctg
gccaataccatgaacggctatcgcgtcgctcagcgcggcaacatcggttacaccgcctcg
gcgtggaccatcaccgaccaggaagagttcgaccgcgtggcgggtaccctgcgtccggaa
aagaactggaacctcaccgtgggtgcatcgcatcgcttcgaccggctgacgatcaccggc
gacgtgttctacaacgacatccgcaaccgcctgctgtcggccgccatcggcacccagttc
gcacagatcaataccgtgcggctgatgccgaagatgcacgtgatcggtgccgacctcggc
atcaccgccgacctgaccgaccacctgcagttctaccagggcgtggccgtggcccgttcg
tactacgacagcgatttcgtggtgggtgacacggtgtacccgatcaagggcaacgcccag
ccgggctacccgcagatctcgctggtcagcgacctgtccgcccacttcggtgactggcgc
tttggtgcaaccagcacctcgtacctgcgccagcccttcacctacgagaacgacatccgc
gtgcccacgttctggcaggtcaacacctacgccgcttaccgcttcggtgcggacagcgcc
gtgcccggcctggagctgcggctggacgtgagcaacctgttcaaccgccacaacatcggc
accgccaccatcgccggctcgtcgttctcgggggattaccagaccctgcagcgcagcgcg
ccacggcagctgatgttcagtacctcgatggcgttctga
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