Stenotrophomonas sp. Pemsol: PEM_17915
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Entry
PEM_17915 CDS
T10809
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
steo Stenotrophomonas sp. Pemsol
Pathway
steo03030
DNA replication
steo03430
Mismatch repair
steo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PEM_17915
03430 Mismatch repair
PEM_17915
03440 Homologous recombination
PEM_17915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
steo03032
]
PEM_17915
03400 DNA repair and recombination proteins [BR:
steo03400
]
PEM_17915
Enzymes [BR:
steo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PEM_17915
DNA replication proteins [BR:
steo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PEM_17915
DNA repair and recombination proteins [BR:
steo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PEM_17915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AYA92528
LinkDB
All DBs
Position
complement(3872540..3873049)
Genome browser
AA seq
169 aa
AA seq
DB search
MNRIVALDTETTGISHRLGHRVIEIGAVELIDGQLSGRQFHTYLQPQRKVDWDAQRVHGI
SDAMLVGKPLFSSKAAELLDFLRGSEMVAHNATFDVGFLDNELRLAGIPGTLAQHCRITC
SLKLARGRWPGQGNKLDDVLQRLRIPGNRGLHGALKDAHLLAQVIPHLR
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcatcgtcgcactggacaccgaaaccaccggcatctcccaccgcctggggcac
cgggtgatcgaaatcggtgccgtcgaactgatcgacggccagctcagcggccgccagttc
cacacctacctgcagccgcagcgcaaggtggactgggacgcacagcgcgtgcatggcatc
agcgatgcgatgctggtgggcaaaccgctgttctccagcaaggccgccgaactgctggac
ttcctgcgcggcagcgagatggtcgcgcacaacgccaccttcgacgtgggtttcctggac
aacgagctgcgcctggccggcattcccggcacgctggcccagcactgccgcatcacctgc
agcctgaagctggcgcgcgggcgctggcccggccagggcaacaagttggacgatgtgctg
cagcgcctgcgcatccccggcaaccggggcctgcacggtgcgctcaaggatgcccatctg
ctggcccaggtgattccgcacctgcgctga
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