KEGG   Stenotrophomonas sp. Pemsol: PEM_18075
Entry
PEM_18075         CDS       T10809                                 
Name
(GenBank) pathogenicity protein
  KO
K09800  translocation and assembly module TamB
Organism
steo  Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:steo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:steo02000]
    PEM_18075
Transporters [BR:steo02000]
 Other transporters
  Pores ion channels [TC:1]
   PEM_18075
SSDB
Motif
Pfam: TamB
Other DBs
NCBI-ProteinID: AYA92556
LinkDB
Position
complement(3909132..3912989)
AA seq 1285 aa
MSASAPTPNTPPPRVRFYRRRRFWAWSGAGVIGLVLLALLAVYWLLQTVAGRDVLLAQVV
ARLPVGASFTWDKVEGPVAGPLTLYNVDFRYDDIHFHAERAHLEPDLRPLLGRKLLLDKL
ELTNATLNLAKSDEPFKLPSWPDSLPQIEMPLAIQADAIAIDGFRISQANEPVIDISRVR
GGIEIANGEFQAHKLVVDSDMGNFTAQGRYIPAKDYDTDVTVTAVLPAPRGRTAATVGLV
ARGDLSHMEVAVAGRAPKPLHAMLVFDGRTDPTWNASVRSDELDLALLSPALASSAITPL
SLDFTAAGKGGNANLRGRVKQGEQELELAPSVVSLQDQVLKVSPLLLKGLGGEARLEGTA
DFSQEDQQKLNFSVVARDLSYVPAPDPNTAGSAPVPVTLKEARFGLAGTLKAWAAIGRAE
VEREKQKAQLHFDVRGNDQAASIHQLQAQTPGGQLQVEGQVAWAPQLDWDAKATLKDFDP
GYFVPGWNGRLSGNLASKGRQLPPPANAAPGTAGTLEATVDLPSLKGMLRQRNLDAQGKF
ALQGAQGQGDLKLALGSSRVTASGKVGDRLDIDARFEPLQLSDLLPGADGGLRGQVQVKG
PRDAPDITADLVGNNLNWDGYGAESVSIKGRLPWRGDSGTLAVQGQQVNAGMLLERLNID
AQGSVSNLRLAAQTRNEMGAVELQGSVRQQGTQWRGELASLRIAPVKGDAWALRAPAAFA
INGSTYTLSEACLAAASSGALCAQANWPREGLVVRSDALPLALVQPWLPPQSGRRIYLRG
DVSLDAQIRPRGNAWEGHVEVRSKEGGVRLGENRNTVGDTTRGELVRYDQFSLKLDMTPA
SIKGYLGMGFQGNGFVDAKMQTGWEASAPLNGELYLNMSRLYWLELFSPDIVRPTGLIEG
HVSLRGTRGQPSLGGDAQLSNFKGEFPALGLTFDQGKGSFVAQPDGSAKITAQANSGQGT
LYVDGGLSWFGDAQPLQLKIHGENVLLSNTSELRIVANPNLDFTLAKAAMELRGTVHVPE
ADIDLERLDRGTSVSEDVVVLDPADPEESRTSPLDMDLTVSLGDKVKMTGFGLKGALTGK
MQVWAKPGREMTANGGLEVSGRYKAYGQDLTITRGNLNWNYNAVSDPRINIRAERRIGDV
TAGIDVTGRAQQPRADVWSDPAMSQSEALAYLVLGRSLTGASSDQAQQVNAASAALSAGS
GLLASQLGAKLGLDDAGVSQSRALGGSVIGVGKYISPKLYVGYGVSLVGAGSVITLKYLL
RRGFDVEVESSTVENRGSINWRREK
NT seq 3858 nt   +upstreamnt  +downstreamnt
gtgagcgcgtccgcaccgaccccgaacaccccgccgccacgcgtgcgcttctatcgccgt
cgccgcttctgggcatggtccggcgccggcgtgatcggcctggtgctgctggccctgctg
gcggtgtactggctgctgcagaccgtggccggccgtgacgtactgctggcccaggtggtg
gcgcggctgccggtgggtgccagcttcacctgggacaaggtggagggtccggtggccgga
ccgctgaccctgtacaacgtcgacttccgctatgacgacatccatttccatgccgagcgt
gcgcacctggagccggacctgcgcccgctgctgggccgcaagctgctgctggacaagctg
gagctgaccaacgcgacgttgaacctggccaagagcgatgagccgttcaagctgccgtcc
tggcccgattccctgccgcagatcgagatgccgctggcgatccaggccgatgccatcgcc
atcgatggcttccgcatcagccaggccaacgaaccggtgatcgacatcagccgcgtgcgc
ggcggcatcgagatcgccaacggcgagttccaggcgcacaagctggtggtggacagtgac
atgggcaacttcactgcccagggccgttacatcccggccaaggactacgacaccgacgtg
acggtgacggcggtgttgccggcaccgcgtgggcgcacagccgctaccgtcggcctggtc
gcccgcggtgacctgtcgcacatggaagtggcggtggccgggcgtgcaccgaagccgctg
cacgcgatgctggtgttcgatggccgcaccgacccgacgtggaacgccagcgtgcgcagc
gacgagctggatctggcgttgctgtcgccggccttggcgagctcggcgatcacgccgttg
tcgctggatttcaccgctgctggcaagggcggcaatgccaacctgcgtggcagggtgaag
cagggcgagcaggaactggaactggcaccgtccgtggtgtcattgcaggaccaggtgctg
aaggtttcgccgctgctgctgaagggtctcggtggcgaagcccgcctggagggtaccgcc
gatttcagccaggaagaccagcagaagctcaacttctcggtggtcgcgcgtgacctgagc
tatgtaccggcgcctgatccgaacaccgccggcagcgcaccggtgccggtcactctgaag
gaagcacgcttcggcctggccggtaccctgaaggcctgggcggcgatcggccgcgccgag
gtcgaacgcgaaaagcagaaggcgcagctgcacttcgatgtgcgtggcaacgatcaggcc
gcgtcgatccaccagctgcaggcgcagacgcccggtggccagctgcaggtggaaggccag
gtggcgtgggcgccgcagctggactgggacgccaaggccacgctgaaggacttcgacccc
ggctatttcgtgccgggctggaacggccgcctgtccggcaacctggcctccaagggccgc
cagctgccgccgccggccaatgccgcaccgggcaccgccggtacgctggaagccacggtg
gacctgccctcgctgaagggcatgctgcgccagcgcaatctcgacgcacagggcaagttc
gcgctgcagggcgcgcagggccaaggtgacctgaaactggcgttgggcagcagccgggtg
accgcgtcgggcaaggtcggcgaccgcctcgacatcgatgcgcgtttcgagccattgcag
ttgagcgacctgctgccgggcgcagacggtggcctgcgtggccaggtacaggtgaagggc
ccgcgcgatgcgccggacatcaccgccgacctggtcggcaacaacctcaactgggacggc
tacggcgccgagagcgtgagcatcaagggccgcctgccgtggcgcggcgacagcggcacg
ctggccgtgcagggccagcaggtcaacgcgggcatgttgctggagcggctgaacatcgac
gcacagggcagtgtgtccaacctgcgcctggccgcgcagacccgcaacgagatgggtgcg
gtcgagctgcagggcagcgtgcgccagcagggcacgcagtggcgtggcgagctggcgtcg
ctgcgcatcgcaccggtgaagggcgatgcctgggcgctgcgtgcaccggcggcgttcgcg
atcaacggcagcacctacacgctgtccgaagcctgcctggccgcggccagcagcggcgcg
ctgtgcgcacaggccaactggccgcgcgaaggcctggtggtgcgcagcgacgcgctgcca
ctggcgctggtgcagccgtggttgccgccgcagtccggccgccgcatctaccttcgcggc
gatgtcagcctggacgcgcagatccgcccgcgcggcaacgcctgggaaggccatgtggaa
gtgcgctcgaaggaaggcggcgtgcgcctgggcgagaaccgcaacaccgtgggcgatacc
acccgcggcgagctggtgcgctatgaccagttctcgctgaagctcgacatgaccccggcc
agcatcaagggctacctgggcatgggcttccagggcaatggcttcgtcgacgccaagatg
cagaccggctgggaagccagtgcgccgcttaatggtgagctctacctcaacatgtcgcgg
ctgtactggctggagctgttctcgccggacatcgtgcgaccgaccggcctgatcgaaggc
cacgtcagcctgcgcgggacgcgaggccagccgtcgctgggcggtgacgcacagctgagc
aacttcaagggcgaattcccggcgctgggcctgaccttcgaccagggcaagggcagcttc
gtggcccagcccgatggttcggccaagatcaccgcgcaggccaactcgggccagggcacg
ctgtacgtggacggtggcctgtcgtggttcggcgatgcgcagccgctgcagctgaagatc
catggcgagaacgtgctgctgtccaacaccagcgaactgcgcatcgtcgccaaccccaac
ctcgacttcaccctggccaaggcggcgatggagctgcgcggcaccgtgcacgtgcccgag
gccgacatcgatctggaacgcctggaccgcggcacctcggtgtccgaagacgtggtggtg
ctcgacccggccgatccggaagagtcgcgcacctcgccgctggacatggacctgacggtc
agcctgggcgacaaggtgaagatgaccgggttcggcctgaagggcgcgctgaccggcaag
atgcaggtctgggccaagcccggccgcgaaatgaccgccaatggcggcctggaagtgagc
ggccgctacaaggcgtatgggcaggacctgaccatcacccgtggcaacctcaactggaac
tacaacgcggtgtccgacccgcgcatcaacatccgcgccgagcgccgcatcggtgatgtc
accgccggcatcgacgtgaccgggcgtgcccagcaaccgcgtgccgacgtgtggtccgat
ccggcgatgtcgcagtccgaggcactggcctatctggtgctgggacgcagcctgaccggc
gccagcagcgaccaggcgcagcaggtcaacgcggcctcggcggcgctctcggctggcagt
ggcctgctcgcctcgcagctgggtgccaagctgggcctggatgatgcaggcgtgagccag
tcgcgcgcgctgggtggttcggtgatcggcgtcggcaagtacatctcgcccaagctttac
gtgggttacggcgtgtcgctggtgggcgccggttcggtgatcacgctgaagtacctgctg
cgccgcgggtttgatgtggaagtggaatcgagcacggtggaaaaccgtggttcgatcaac
tggcggcgggagaaatag

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