Stenotrophomonas sp. Pemsol: PEM_18075
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Entry
PEM_18075 CDS
T10809
Name
(GenBank) pathogenicity protein
KO
K09800
translocation and assembly module TamB
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
steo02000
]
PEM_18075
Transporters [BR:
steo02000
]
Other transporters
Pores ion channels [TC:
1
]
PEM_18075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AYA92556
LinkDB
All DBs
Position
complement(3909132..3912989)
Genome browser
AA seq
1285 aa
AA seq
DB search
MSASAPTPNTPPPRVRFYRRRRFWAWSGAGVIGLVLLALLAVYWLLQTVAGRDVLLAQVV
ARLPVGASFTWDKVEGPVAGPLTLYNVDFRYDDIHFHAERAHLEPDLRPLLGRKLLLDKL
ELTNATLNLAKSDEPFKLPSWPDSLPQIEMPLAIQADAIAIDGFRISQANEPVIDISRVR
GGIEIANGEFQAHKLVVDSDMGNFTAQGRYIPAKDYDTDVTVTAVLPAPRGRTAATVGLV
ARGDLSHMEVAVAGRAPKPLHAMLVFDGRTDPTWNASVRSDELDLALLSPALASSAITPL
SLDFTAAGKGGNANLRGRVKQGEQELELAPSVVSLQDQVLKVSPLLLKGLGGEARLEGTA
DFSQEDQQKLNFSVVARDLSYVPAPDPNTAGSAPVPVTLKEARFGLAGTLKAWAAIGRAE
VEREKQKAQLHFDVRGNDQAASIHQLQAQTPGGQLQVEGQVAWAPQLDWDAKATLKDFDP
GYFVPGWNGRLSGNLASKGRQLPPPANAAPGTAGTLEATVDLPSLKGMLRQRNLDAQGKF
ALQGAQGQGDLKLALGSSRVTASGKVGDRLDIDARFEPLQLSDLLPGADGGLRGQVQVKG
PRDAPDITADLVGNNLNWDGYGAESVSIKGRLPWRGDSGTLAVQGQQVNAGMLLERLNID
AQGSVSNLRLAAQTRNEMGAVELQGSVRQQGTQWRGELASLRIAPVKGDAWALRAPAAFA
INGSTYTLSEACLAAASSGALCAQANWPREGLVVRSDALPLALVQPWLPPQSGRRIYLRG
DVSLDAQIRPRGNAWEGHVEVRSKEGGVRLGENRNTVGDTTRGELVRYDQFSLKLDMTPA
SIKGYLGMGFQGNGFVDAKMQTGWEASAPLNGELYLNMSRLYWLELFSPDIVRPTGLIEG
HVSLRGTRGQPSLGGDAQLSNFKGEFPALGLTFDQGKGSFVAQPDGSAKITAQANSGQGT
LYVDGGLSWFGDAQPLQLKIHGENVLLSNTSELRIVANPNLDFTLAKAAMELRGTVHVPE
ADIDLERLDRGTSVSEDVVVLDPADPEESRTSPLDMDLTVSLGDKVKMTGFGLKGALTGK
MQVWAKPGREMTANGGLEVSGRYKAYGQDLTITRGNLNWNYNAVSDPRINIRAERRIGDV
TAGIDVTGRAQQPRADVWSDPAMSQSEALAYLVLGRSLTGASSDQAQQVNAASAALSAGS
GLLASQLGAKLGLDDAGVSQSRALGGSVIGVGKYISPKLYVGYGVSLVGAGSVITLKYLL
RRGFDVEVESSTVENRGSINWRREK
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgtccgcaccgaccccgaacaccccgccgccacgcgtgcgcttctatcgccgt
cgccgcttctgggcatggtccggcgccggcgtgatcggcctggtgctgctggccctgctg
gcggtgtactggctgctgcagaccgtggccggccgtgacgtactgctggcccaggtggtg
gcgcggctgccggtgggtgccagcttcacctgggacaaggtggagggtccggtggccgga
ccgctgaccctgtacaacgtcgacttccgctatgacgacatccatttccatgccgagcgt
gcgcacctggagccggacctgcgcccgctgctgggccgcaagctgctgctggacaagctg
gagctgaccaacgcgacgttgaacctggccaagagcgatgagccgttcaagctgccgtcc
tggcccgattccctgccgcagatcgagatgccgctggcgatccaggccgatgccatcgcc
atcgatggcttccgcatcagccaggccaacgaaccggtgatcgacatcagccgcgtgcgc
ggcggcatcgagatcgccaacggcgagttccaggcgcacaagctggtggtggacagtgac
atgggcaacttcactgcccagggccgttacatcccggccaaggactacgacaccgacgtg
acggtgacggcggtgttgccggcaccgcgtgggcgcacagccgctaccgtcggcctggtc
gcccgcggtgacctgtcgcacatggaagtggcggtggccgggcgtgcaccgaagccgctg
cacgcgatgctggtgttcgatggccgcaccgacccgacgtggaacgccagcgtgcgcagc
gacgagctggatctggcgttgctgtcgccggccttggcgagctcggcgatcacgccgttg
tcgctggatttcaccgctgctggcaagggcggcaatgccaacctgcgtggcagggtgaag
cagggcgagcaggaactggaactggcaccgtccgtggtgtcattgcaggaccaggtgctg
aaggtttcgccgctgctgctgaagggtctcggtggcgaagcccgcctggagggtaccgcc
gatttcagccaggaagaccagcagaagctcaacttctcggtggtcgcgcgtgacctgagc
tatgtaccggcgcctgatccgaacaccgccggcagcgcaccggtgccggtcactctgaag
gaagcacgcttcggcctggccggtaccctgaaggcctgggcggcgatcggccgcgccgag
gtcgaacgcgaaaagcagaaggcgcagctgcacttcgatgtgcgtggcaacgatcaggcc
gcgtcgatccaccagctgcaggcgcagacgcccggtggccagctgcaggtggaaggccag
gtggcgtgggcgccgcagctggactgggacgccaaggccacgctgaaggacttcgacccc
ggctatttcgtgccgggctggaacggccgcctgtccggcaacctggcctccaagggccgc
cagctgccgccgccggccaatgccgcaccgggcaccgccggtacgctggaagccacggtg
gacctgccctcgctgaagggcatgctgcgccagcgcaatctcgacgcacagggcaagttc
gcgctgcagggcgcgcagggccaaggtgacctgaaactggcgttgggcagcagccgggtg
accgcgtcgggcaaggtcggcgaccgcctcgacatcgatgcgcgtttcgagccattgcag
ttgagcgacctgctgccgggcgcagacggtggcctgcgtggccaggtacaggtgaagggc
ccgcgcgatgcgccggacatcaccgccgacctggtcggcaacaacctcaactgggacggc
tacggcgccgagagcgtgagcatcaagggccgcctgccgtggcgcggcgacagcggcacg
ctggccgtgcagggccagcaggtcaacgcgggcatgttgctggagcggctgaacatcgac
gcacagggcagtgtgtccaacctgcgcctggccgcgcagacccgcaacgagatgggtgcg
gtcgagctgcagggcagcgtgcgccagcagggcacgcagtggcgtggcgagctggcgtcg
ctgcgcatcgcaccggtgaagggcgatgcctgggcgctgcgtgcaccggcggcgttcgcg
atcaacggcagcacctacacgctgtccgaagcctgcctggccgcggccagcagcggcgcg
ctgtgcgcacaggccaactggccgcgcgaaggcctggtggtgcgcagcgacgcgctgcca
ctggcgctggtgcagccgtggttgccgccgcagtccggccgccgcatctaccttcgcggc
gatgtcagcctggacgcgcagatccgcccgcgcggcaacgcctgggaaggccatgtggaa
gtgcgctcgaaggaaggcggcgtgcgcctgggcgagaaccgcaacaccgtgggcgatacc
acccgcggcgagctggtgcgctatgaccagttctcgctgaagctcgacatgaccccggcc
agcatcaagggctacctgggcatgggcttccagggcaatggcttcgtcgacgccaagatg
cagaccggctgggaagccagtgcgccgcttaatggtgagctctacctcaacatgtcgcgg
ctgtactggctggagctgttctcgccggacatcgtgcgaccgaccggcctgatcgaaggc
cacgtcagcctgcgcgggacgcgaggccagccgtcgctgggcggtgacgcacagctgagc
aacttcaagggcgaattcccggcgctgggcctgaccttcgaccagggcaagggcagcttc
gtggcccagcccgatggttcggccaagatcaccgcgcaggccaactcgggccagggcacg
ctgtacgtggacggtggcctgtcgtggttcggcgatgcgcagccgctgcagctgaagatc
catggcgagaacgtgctgctgtccaacaccagcgaactgcgcatcgtcgccaaccccaac
ctcgacttcaccctggccaaggcggcgatggagctgcgcggcaccgtgcacgtgcccgag
gccgacatcgatctggaacgcctggaccgcggcacctcggtgtccgaagacgtggtggtg
ctcgacccggccgatccggaagagtcgcgcacctcgccgctggacatggacctgacggtc
agcctgggcgacaaggtgaagatgaccgggttcggcctgaagggcgcgctgaccggcaag
atgcaggtctgggccaagcccggccgcgaaatgaccgccaatggcggcctggaagtgagc
ggccgctacaaggcgtatgggcaggacctgaccatcacccgtggcaacctcaactggaac
tacaacgcggtgtccgacccgcgcatcaacatccgcgccgagcgccgcatcggtgatgtc
accgccggcatcgacgtgaccgggcgtgcccagcaaccgcgtgccgacgtgtggtccgat
ccggcgatgtcgcagtccgaggcactggcctatctggtgctgggacgcagcctgaccggc
gccagcagcgaccaggcgcagcaggtcaacgcggcctcggcggcgctctcggctggcagt
ggcctgctcgcctcgcagctgggtgccaagctgggcctggatgatgcaggcgtgagccag
tcgcgcgcgctgggtggttcggtgatcggcgtcggcaagtacatctcgcccaagctttac
gtgggttacggcgtgtcgctggtgggcgccggttcggtgatcacgctgaagtacctgctg
cgccgcgggtttgatgtggaagtggaatcgagcacggtggaaaaccgtggttcgatcaac
tggcggcgggagaaatag
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