Sulfuracidifex tepidarius: IC006_0866
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Entry
IC006_0866 CDS
T06394
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
step
Sulfuracidifex tepidarius
Brite
KEGG Orthology (KO) [BR:
step00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
step03016
]
IC006_0866
Enzymes [BR:
step01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
IC006_0866
Transfer RNA biogenesis [BR:
step03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
IC006_0866
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
DUF2204
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
BBG23579
UniProt:
A0A510E1F6
LinkDB
All DBs
Position
821943..822491
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AA seq
182 aa
AA seq
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MRLFIAVDIPINQKIIDLIEQINQSGADVKSVELENLHLTLLFIGEKRENELEGIEQSMN
KVRFNEINALAQGIGFFPNEERPRVMWIGIRDQGEFRKVREQLVKELRMRKIYFEDRNEF
SPHLTLCRIRSGRGVDKLREIGKSKKDEVFEDFKVKEVKLFKSTLTPKGPIYEQLYSIRS
EG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgagactatttattgcagtcgatattccaattaatcagaaaattatagacttgatagaa
caaataaatcaaagtggagccgacgtgaagagcgtcgagcttgagaacctccacttgact
cttctctttataggagaaaagagagagaatgaattagagggaatagaacagtccatgaac
aaggtaaggttcaacgagattaacgctttggcacagggaatagggttctttcctaacgag
gagagacctagagtgatgtggataggaataagggatcaaggagagttcaggaaagtgaga
gaacagttggttaaggaactgaggatgaggaaaatttactttgaagatagaaacgagttc
tcgccccacttgaccttgtgcagaataaggtcaggaagaggagtcgacaagctgagggaa
ataggaaaatctaaaaaggatgaagtcttcgaggacttcaaggtaaaagaagtgaagctt
ttcaagagtacgctcacgcccaagggacccatctatgagcaactatactctatcagatct
gaaggatga
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