Sulfuracidifex tepidarius: IC006_1159
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Entry
IC006_1159 CDS
T06394
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
step
Sulfuracidifex tepidarius
Pathway
step03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
step00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
IC006_1159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
step03000
]
IC006_1159
03021 Transcription machinery [BR:
step03021
]
IC006_1159
Transcription factors [BR:
step03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
IC006_1159
Transcription machinery [BR:
step03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
IC006_1159
RNA polymerase III system
TFIIIB
IC006_1159
RNA polymerase I system
SL1/TIF-1B
IC006_1159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
NMT1_3
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
BBG23863
UniProt:
A0A510E3H9
LinkDB
All DBs
Position
complement(1066465..1067070)
Genome browser
AA seq
201 aa
AA seq
DB search
MVIIADSNVQYKAVINIENIVATVTLDQNLDLYAMERSIPNIEYDPDQFPGLIFRLEQPK
VTSLIFKSGKMVVTGAKSTDELIKAVKRIIRTLRRYSIRIIGKPKIQIQNIVASANLHVH
VNLDKAAFLLENNMYEPEQFPGLIFRMDEPKVVLLIFSSGKMVITGAKREDEVYKAVKRI
FEKLNELECISAVEEEEELEL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
gtggttataatagcagattcaaacgtccagtacaaagccgtaattaacatagagaacata
gttgccactgtcaccttagatcaaaacttagatctatacgcaatggagaggagcattccc
aacatagaatatgatccagatcagttccctggtttaatattcaggctggaacaacccaag
gtaacgtccttaattttcaagtcggggaaaatggtggtaactggtgctaagagcacagac
gaattgattaaggctgttaagcgaataattagaaccctgagaaggtatagcataaggata
attggaaaacctaaaatacagatacagaacatcgtagcgtctgctaaccttcatgtgcat
gtcaacttagataaggctgcatttctccttgaaaataatatgtacgagcctgaacagttc
cctggtttaatatttagaatggacgaaccaaaagtcgttctcttgatattcagcagtggt
aaaatggtaataaccggggcgaagagagaggacgaagtttacaaggcggtgaaaaggata
ttcgagaaacttaacgagcttgaatgcataagtgcagtagaagaggaagaagagttagaa
ttgtaa
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