Sulfuracidifex tepidarius: IC006_1532
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Entry
IC006_1532 CDS
T06394
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
step
Sulfuracidifex tepidarius
Brite
KEGG Orthology (KO) [BR:
step00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
step03016
]
IC006_1532
Enzymes [BR:
step01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
IC006_1532
Transfer RNA biogenesis [BR:
step03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
IC006_1532
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
BBG24225
UniProt:
A0A510DVK2
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All DBs
Position
complement(1380404..1380949)
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AA seq
181 aa
AA seq
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MQGILLENRVVVVNIEDAREIYKKGFFGKPLGVPKPKGPEEVDRPLELSFVESLYLMENF
GLEIVNLDGKKVTKDELTKHALATVDRFNVLYAVYSDLRKKKFIVRSGIKFGADFAVYTM
GPGIEHAPFVVIALDINNEISPLELMSFGRVSHSTRKTLVLAMVDLKKELIKYTMFKWVK
M
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtatattgctggagaacagagttgtggtagttaacatagaagatgcaagagag
atttataagaaaggtttcttcggtaagcctctgggagttcctaagccaaagggacctgag
gaggtcgacaggcctttagagttatcctttgtggaatccttatacctaatggaaaacttt
gggttagagatagtcaacttagatgggaagaaagtgactaaggatgagctgactaaacat
gctttggctactgtagataggttcaatgtgctttacgctgtgtactcggatttaaggaaa
aagaagttcatcgttaggtctggaatcaagttcggagcagacttcgctgtttacacgatg
ggtccgggcatagagcatgctcctttcgtagtcatagcgttggatataaacaacgagata
tctcctttagaactcatgagtttcggcagggtatctcatagcactaggaagaccttggtt
ctagctatggtagatctcaaaaaggaactcataaagtacacaatgtttaaatgggtaaaa
atgtaa
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