Sulfuracidifex tepidarius: IC006_1585
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Entry
IC006_1585 CDS
T06394
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
step
Sulfuracidifex tepidarius
Pathway
step03022
Basal transcription factors
step03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
step00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
IC006_1585
09124 Replication and repair
03420 Nucleotide excision repair
IC006_1585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
step03021
]
IC006_1585
03036 Chromosome and associated proteins [BR:
step03036
]
IC006_1585
03400 DNA repair and recombination proteins [BR:
step03400
]
IC006_1585
Enzymes [BR:
step01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
IC006_1585
Transcription machinery [BR:
step03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
IC006_1585
Chromosome and associated proteins [BR:
step03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
IC006_1585
DNA repair and recombination proteins [BR:
step03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
IC006_1585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
AAA_25
nSTAND3
PhoH
Zeta_toxin
nSTAND_NTPase5
DUF2949
Motif
Other DBs
NCBI-ProteinID:
BBG24276
UniProt:
A0A510DVL2
LinkDB
All DBs
Position
complement(1423552..1425204)
Genome browser
AA seq
550 aa
AA seq
DB search
MKYREWQRSLRDKVIFSLKRDKVVLLQAPTGSGKTFFALDVAFSVSNKVLITVRTHNEFY
PFYREIKTHFQDKRYVSVVGRTNSCLLADEKAKPEDISCSGCVYLSWRDVVFQGSPFEYL
AKLKEEGKREGFCPYHSIMNSVEEADVVLITYPYLFIPSLRDSLGISLSDYTVVVDEAHN
LDSLLDLEERRISQASINLALKQAENEETRLILDKLRSKMTSLVFNEKKYILLDKGRVSS
LLEKEELSVIADEASHLSQKMIAQRKITANHLLSIVKFFESLEDSEIKVFSSNNNLVAKP
VSSMKYLEFFNDDDVKGIFMSGTLQSKEYFSSVLGLRKDAVYVDVEKEVGRVGGQYECFI
ALDVTSSYALRGEEMSKRYASYLLRIYYQSARHVLSVFPSYEMIEKISSFIRSINTFPET
PRTKIDDLIEHVKHTPKVLIMATARGKLSEGVEVSEDGRSLISDVAIVGVPYPPLDDYMK
ARAEEVSKISKKNYLEELMQMPAYISVRQAIGRSIRSPEDKSNVWLLDRRFNNLWWKKNI
KCFNPKVIRL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatatagggaatggcaaagatcgttaagggataaagtaatttttagtttaaagcgg
gataaagtagttcttttacaagctccaactggaagtggcaagactttctttgcattggat
gttgctttctcagtgtcaaacaaggtattgattaccgtacggactcataatgagttttat
cccttttacagggaaataaagacgcatttccaagacaaaaggtacgtttccgttgtaggt
agaacaaattcctgcttattggcagacgagaaggcaaaacctgaggacatatcttgctct
ggttgcgtttatctttcttggagggatgtcgtcttccaaggttcacctttcgagtacctt
gctaagctcaaagaagagggaaaaagagagggtttctgtccatatcattcaataatgaat
tcggtggaggaggctgacgttgttttaattacatatccttacctcttcataccgtcgctt
agggactccttaggcatatctttgagcgactatacagtagttgtagatgaagcccacaac
ttggacagtcttctagatctggaggaaaggcggatctctcaggcttcgataaatcttgcc
ttaaagcaagctgaaaacgaagagaccagactaattttagacaaactcagatcaaaaatg
acgagcttagttttcaatgaaaagaagtatatactattagataaaggtcgtgtaagctcc
ctcttagagaaggaagagctatccgtgatagcggatgaagcttctcatctctctcaaaag
atgatagctcagaggaagataacagctaatcaccttctttctatagttaagttcttcgag
tcattagaagacagcgaaattaaggttttctcgtcaaataataatcttgtggctaaaccg
gtctcgtctatgaaatacttagaattcttcaatgacgatgacgtgaagggaatatttatg
tccggcacactgcaaagcaaagaatacttttcctctgttttagggctgagaaaagacgca
gtatatgttgatgtggagaaggaagtaggaagagtaggtggtcaatacgagtgtttcatt
gcgcttgacgttacttcatcttacgcgttgaggggagaggagatgagcaagcgatatgcg
tcatatctcctgagaatatattatcagtctgctaggcacgttttatcagttttccccagt
tacgagatgatagagaagatctcctcattcataaggtcaataaacacttttcctgaaacg
ccgaggactaaaatagacgaccttattgagcatgtaaagcatacgcctaaggtattgata
atggcaactgctaggggtaaactttcggaaggagtggaggtatccgaggacggaaggagc
ttgataagtgatgtcgcaatagtcggggttccttatcctcctttggacgactacatgaag
gcaagagctgaagaggtatccaagatttctaaaaagaattacttggaggagctgatgcaa
atgccagcttacatttccgtaaggcaagctatagggaggagtataagaagtccagaagac
aaaagcaatgtttggttacttgacagaaggtttaacaatctatggtggaagaaaaatatt
aaatgcttcaaccctaaagtaatccgtctctag
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